SMTL ID : 6zwi.1

Human butyrylcholinesterase in complex with ((6-((2E,4E)-5-(benzo[d][1,3]dioxol-5-yl)penta-2,4-dienamido)hexyl)triphenylphosphonium bromide)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-octamer

Ligands

8 x NAG- NAG- MAN- MAN- FUC: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN-MAN-FUC.1: 2 residues within 4Å: Chain A: R.14, N.57 No protein-ligand interaction detected (PLIP) NAG-NAG-MAN-MAN-FUC.21: 2 residues within 4Å: Chain B: R.14, N.57 No protein-ligand interaction detected (PLIP) NAG-NAG-MAN-MAN-FUC.41: 2 residues within 4Å: Chain C: R.14, N.57 No protein-ligand interaction detected (PLIP) NAG-NAG-MAN-MAN-FUC.61: 2 residues within 4Å: Chain D: R.14, N.57 No protein-ligand interaction detected (PLIP) NAG-NAG-MAN-MAN-FUC.81: 2 residues within 4Å: Chain E: R.14, N.57 No protein-ligand interaction detected (PLIP) NAG-NAG-MAN-MAN-FUC.101: 2 residues within 4Å: Chain F: R.14, N.57 No protein-ligand interaction detected (PLIP) NAG-NAG-MAN-MAN-FUC.121: 2 residues within 4Å: Chain G: R.14, N.57 No protein-ligand interaction detected (PLIP) NAG-NAG-MAN-MAN-FUC.141: 2 residues within 4Å: Chain H: R.14, N.57 No protein-ligand interaction detected (PLIP)

8 x GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose(Non-covalent)

GAL-SIA.2: 3 residues within 4Å: Chain A: K.60, N.63, D.87 5 PLIP interactions: 5 interactions with chain A Water bridges: A:N.63, A:N.63, A:D.87, A:D.87 Salt bridges: A:K.60 GAL-SIA.22: 3 residues within 4Å: Chain B: K.60, N.63, D.87 5 PLIP interactions: 5 interactions with chain B Water bridges: B:N.63, B:N.63, B:D.87, B:D.87 Salt bridges: B:K.60 GAL-SIA.42: 3 residues within 4Å: Chain C: K.60, N.63, D.87 5 PLIP interactions: 5 interactions with chain C Water bridges: C:N.63, C:N.63, C:D.87, C:D.87 Salt bridges: C:K.60 GAL-SIA.62: 3 residues within 4Å: Chain D: K.60, N.63, D.87 5 PLIP interactions: 5 interactions with chain D Water bridges: D:N.63, D:N.63, D:D.87, D:D.87 Salt bridges: D:K.60 GAL-SIA.82: 3 residues within 4Å: Chain E: K.60, N.63, D.87 5 PLIP interactions: 5 interactions with chain E Water bridges: E:N.63, E:N.63, E:D.87, E:D.87 Salt bridges: E:K.60 GAL-SIA.102: 3 residues within 4Å: Chain F: K.60, N.63, D.87 5 PLIP interactions: 5 interactions with chain F Water bridges: F:N.63, F:N.63, F:D.87, F:D.87 Salt bridges: F:K.60 GAL-SIA.122: 3 residues within 4Å: Chain G: K.60, N.63, D.87 5 PLIP interactions: 5 interactions with chain G Water bridges: G:N.63, G:N.63, G:D.87, G:D.87 Salt bridges: G:K.60 GAL-SIA.142: 3 residues within 4Å: Chain H: K.60, N.63, D.87 5 PLIP interactions: 5 interactions with chain H Water bridges: H:N.63, H:N.63, H:D.87, H:D.87 Salt bridges: H:K.60

8 x NAG- FUC: alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-FUC.3: 4 residues within 4Å: Chain A: N.106, N.188, K.190, S.191 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain D Hydrogen bonds: A:N.188, A:S.191, A:N.188, A:K.190 Water bridges: A:R.219, A:K.476, A:K.476, D:Q.311 NAG-FUC.23: 4 residues within 4Å: Chain B: N.106, N.188, K.190, S.191 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:N.188, B:S.191, B:N.188, B:K.190 Water bridges: B:R.219, B:K.476, B:K.476, C:Q.311 NAG-FUC.43: 4 residues within 4Å: Chain C: N.106, N.188, K.190, S.191 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:N.188, C:S.191, C:N.188, C:K.190 Water bridges: C:R.219, C:R.219, C:K.476, A:Q.311 NAG-FUC.63: 4 residues within 4Å: Chain D: N.106, N.188, K.190, S.191 3 PLIP interactions: 2 interactions with chain D, 1 interactions with chain B Hydrogen bonds: D:N.188, D:S.191, D:N.188, D:K.190 Water bridges: D:R.219, D:R.219, D:K.476, B:Q.311 NAG-FUC.83: 4 residues within 4Å: Chain E: N.106, N.188, K.190, S.191 3 PLIP interactions: 2 interactions with chain E, 1 interactions with chain H Hydrogen bonds: E:N.188, E:S.191, E:N.188, E:K.190 Water bridges: E:R.219, E:K.476, E:K.476, H:Q.311 NAG-FUC.103: 4 residues within 4Å: Chain F: N.106, N.188, K.190, S.191 3 PLIP interactions: 2 interactions with chain F, 1 interactions with chain G Hydrogen bonds: F:N.188, F:S.191, F:N.188, F:K.190 Water bridges: F:R.219, F:K.476, F:K.476, G:Q.311 NAG-FUC.123: 4 residues within 4Å: Chain G: N.106, N.188, K.190, S.191 3 PLIP interactions: 2 interactions with chain G, 1 interactions with chain E Hydrogen bonds: G:N.188, G:S.191, G:N.188, G:K.190 Water bridges: G:R.219, G:R.219, G:K.476, E:Q.311 NAG-FUC.143: 4 residues within 4Å: Chain H: N.106, N.188, K.190, S.191 3 PLIP interactions: 2 interactions with chain H, 1 interactions with chain F Hydrogen bonds: H:N.188, H:S.191, H:N.188, H:K.190 Water bridges: H:R.219, H:R.219, H:K.476, F:Q.311

16 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.4: 6 residues within 4Å: Chain A: N.241, N.245, L.249, F.278, P.281, Y.282 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:N.245, A:L.249 Hydrogen bonds: A:F.278 NAG-NAG-FUC.5: 4 residues within 4Å: Chain A: G.336, S.338, N.341, N.342 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.336 NAG-NAG-FUC.24: 6 residues within 4Å: Chain B: N.241, N.245, L.249, F.278, P.281, Y.282 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:N.245, B:L.249 Hydrogen bonds: B:F.278 NAG-NAG-FUC.25: 4 residues within 4Å: Chain B: G.336, S.338, N.341, N.342 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.336 NAG-NAG-FUC.44: 6 residues within 4Å: Chain C: N.241, N.245, L.249, F.278, P.281, Y.282 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:N.245, C:L.249 Hydrogen bonds: C:F.278 NAG-NAG-FUC.45: 4 residues within 4Å: Chain C: G.336, S.338, N.341, N.342 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:G.336 NAG-NAG-FUC.64: 6 residues within 4Å: Chain D: N.241, N.245, L.249, F.278, P.281, Y.282 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:N.245, D:L.249 Hydrogen bonds: D:F.278 NAG-NAG-FUC.65: 4 residues within 4Å: Chain D: G.336, S.338, N.341, N.342 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:G.336 NAG-NAG-FUC.84: 6 residues within 4Å: Chain E: N.241, N.245, L.249, F.278, P.281, Y.282 3 PLIP interactions: 3 interactions with chain E Hydrophobic interactions: E:N.245, E:L.249 Hydrogen bonds: E:F.278 NAG-NAG-FUC.85: 4 residues within 4Å: Chain E: G.336, S.338, N.341, N.342 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:G.336 NAG-NAG-FUC.104: 6 residues within 4Å: Chain F: N.241, N.245, L.249, F.278, P.281, Y.282 3 PLIP interactions: 3 interactions with chain F Hydrophobic interactions: F:N.245, F:L.249 Hydrogen bonds: F:F.278 NAG-NAG-FUC.105: 4 residues within 4Å: Chain F: G.336, S.338, N.341, N.342 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:G.336 NAG-NAG-FUC.124: 6 residues within 4Å: Chain G: N.241, N.245, L.249, F.278, P.281, Y.282 3 PLIP interactions: 3 interactions with chain G Hydrophobic interactions: G:N.245, G:L.249 Hydrogen bonds: G:F.278 NAG-NAG-FUC.125: 4 residues within 4Å: Chain G: G.336, S.338, N.341, N.342 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:G.336 NAG-NAG-FUC.144: 6 residues within 4Å: Chain H: N.241, N.245, L.249, F.278, P.281, Y.282 3 PLIP interactions: 3 interactions with chain H Hydrophobic interactions: H:N.245, H:L.249 Hydrogen bonds: H:F.278 NAG-NAG-FUC.145: 4 residues within 4Å: Chain H: G.336, S.338, N.341, N.342 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:G.336

16 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.6: 2 residues within 4Å: Chain A: N.256, E.259 Ligand excluded by PLIP NAG.7: 4 residues within 4Å: Chain A: R.465, K.469, E.482, N.485 Ligand excluded by PLIP NAG.26: 2 residues within 4Å: Chain B: N.256, E.259 Ligand excluded by PLIP NAG.27: 4 residues within 4Å: Chain B: R.465, K.469, E.482, N.485 Ligand excluded by PLIP NAG.46: 2 residues within 4Å: Chain C: N.256, E.259 Ligand excluded by PLIP NAG.47: 4 residues within 4Å: Chain C: R.465, K.469, E.482, N.485 Ligand excluded by PLIP NAG.66: 2 residues within 4Å: Chain D: N.256, E.259 Ligand excluded by PLIP NAG.67: 4 residues within 4Å: Chain D: R.465, K.469, E.482, N.485 Ligand excluded by PLIP NAG.86: 2 residues within 4Å: Chain E: N.256, E.259 Ligand excluded by PLIP NAG.87: 4 residues within 4Å: Chain E: R.465, K.469, E.482, N.485 Ligand excluded by PLIP NAG.106: 2 residues within 4Å: Chain F: N.256, E.259 Ligand excluded by PLIP NAG.107: 4 residues within 4Å: Chain F: R.465, K.469, E.482, N.485 Ligand excluded by PLIP NAG.126: 2 residues within 4Å: Chain G: N.256, E.259 Ligand excluded by PLIP NAG.127: 4 residues within 4Å: Chain G: R.465, K.469, E.482, N.485 Ligand excluded by PLIP NAG.146: 2 residues within 4Å: Chain H: N.256, E.259 Ligand excluded by PLIP NAG.147: 4 residues within 4Å: Chain H: R.465, K.469, E.482, N.485 Ligand excluded by PLIP

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.8: 5 residues within 4Å: Chain A: L.18, Y.61, W.98, D.129, K.131 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.98, A:K.131 Water bridges: A:D.129 GOL.28: 5 residues within 4Å: Chain B: L.18, Y.61, W.98, D.129, K.131 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:W.98, B:K.131 Water bridges: B:D.129 GOL.48: 5 residues within 4Å: Chain C: L.18, Y.61, W.98, D.129, K.131 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:W.98, C:K.131 Water bridges: C:D.129 GOL.68: 5 residues within 4Å: Chain D: L.18, Y.61, W.98, D.129, K.131 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:W.98, D:K.131 Water bridges: D:D.129 GOL.88: 5 residues within 4Å: Chain E: L.18, Y.61, W.98, D.129, K.131 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:W.98, E:K.131 Water bridges: E:Y.61 GOL.108: 5 residues within 4Å: Chain F: L.18, Y.61, W.98, D.129, K.131 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:W.98, F:K.131 Water bridges: F:Y.61 GOL.128: 5 residues within 4Å: Chain G: L.18, Y.61, W.98, D.129, K.131 3 PLIP interactions: 3 interactions with chain G Hydrogen bonds: G:W.98, G:K.131 Water bridges: G:Y.61 GOL.148: 5 residues within 4Å: Chain H: L.18, Y.61, W.98, D.129, K.131 3 PLIP interactions: 3 interactions with chain H Hydrogen bonds: H:W.98, H:K.131 Water bridges: H:Y.61

8 x QRH: (2~{E},4~{E})-5-(1,3-benzodioxol-5-yl)-~{N}-[6-(triphenyl-$l^{5}-phosphanyl)hexyl]penta-2,4-dienamide(Non-covalent)

QRH.9: 18 residues within 4Å: Chain A: N.68, I.69, D.70, W.82, G.115, G.116, T.120, Y.128, E.197, S.198, A.328, F.329, Y.332, W.430, M.437, H.438, Y.440 Ligands: LEA.10 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:D.70, A:W.82, A:T.120, A:A.328, A:F.329, A:W.430, A:Y.440 Hydrogen bonds: A:N.68 Water bridges: A:Q.71 pi-Stacking: A:W.82 QRH.29: 18 residues within 4Å: Chain B: N.68, I.69, D.70, W.82, G.115, G.116, T.120, Y.128, E.197, S.198, A.328, F.329, Y.332, W.430, M.437, H.438, Y.440 Ligands: LEA.30 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:D.70, B:W.82, B:T.120, B:A.328, B:F.329, B:W.430, B:Y.440 Hydrogen bonds: B:N.68 Water bridges: B:Q.71 pi-Stacking: B:W.82 QRH.49: 18 residues within 4Å: Chain C: N.68, I.69, D.70, W.82, G.115, G.116, T.120, Y.128, E.197, S.198, A.328, F.329, Y.332, W.430, M.437, H.438, Y.440 Ligands: LEA.50 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:D.70, C:W.82, C:T.120, C:A.328, C:F.329, C:W.430, C:Y.440 Hydrogen bonds: C:N.68 Water bridges: C:Q.71 pi-Stacking: C:W.82 QRH.69: 18 residues within 4Å: Chain D: N.68, I.69, D.70, W.82, G.115, G.116, T.120, Y.128, E.197, S.198, A.328, F.329, Y.332, W.430, M.437, H.438, Y.440 Ligands: LEA.70 10 PLIP interactions: 10 interactions with chain D Hydrophobic interactions: D:D.70, D:W.82, D:T.120, D:A.328, D:F.329, D:W.430, D:Y.440 Hydrogen bonds: D:N.68 Water bridges: D:Q.71 pi-Stacking: D:W.82 QRH.89: 18 residues within 4Å: Chain E: N.68, I.69, D.70, W.82, G.115, G.116, T.120, Y.128, E.197, S.198, A.328, F.329, Y.332, W.430, M.437, H.438, Y.440 Ligands: LEA.90 10 PLIP interactions: 10 interactions with chain E Hydrophobic interactions: E:D.70, E:W.82, E:T.120, E:A.328, E:F.329, E:W.430, E:Y.440 Hydrogen bonds: E:N.68 Water bridges: E:D.70 pi-Stacking: E:W.82 QRH.109: 18 residues within 4Å: Chain F: N.68, I.69, D.70, W.82, G.115, G.116, T.120, Y.128, E.197, S.198, A.328, F.329, Y.332, W.430, M.437, H.438, Y.440 Ligands: LEA.110 10 PLIP interactions: 10 interactions with chain F Hydrophobic interactions: F:D.70, F:W.82, F:T.120, F:A.328, F:F.329, F:W.430, F:Y.440 Hydrogen bonds: F:N.68 Water bridges: F:D.70 pi-Stacking: F:W.82 QRH.129: 18 residues within 4Å: Chain G: N.68, I.69, D.70, W.82, G.115, G.116, T.120, Y.128, E.197, S.198, A.328, F.329, Y.332, W.430, M.437, H.438, Y.440 Ligands: LEA.130 10 PLIP interactions: 10 interactions with chain G Hydrophobic interactions: G:D.70, G:W.82, G:T.120, G:A.328, G:F.329, G:W.430, G:Y.440 Hydrogen bonds: G:N.68 Water bridges: G:D.70 pi-Stacking: G:W.82 QRH.149: 18 residues within 4Å: Chain H: N.68, I.69, D.70, W.82, G.115, G.116, T.120, Y.128, E.197, S.198, A.328, F.329, Y.332, W.430, M.437, H.438, Y.440 Ligands: LEA.150 10 PLIP interactions: 10 interactions with chain H Hydrophobic interactions: H:D.70, H:W.82, H:T.120, H:A.328, H:F.329, H:W.430, H:Y.440 Hydrogen bonds: H:N.68 Water bridges: H:D.70 pi-Stacking: H:W.82

8 x LEA: PENTANOIC ACID(Non-covalent)

LEA.10: 10 residues within 4Å: Chain A: G.116, G.117, S.198, A.199, W.231, L.286, V.288, F.398, H.438 Ligands: QRH.9 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.231, A:W.231, A:L.286, A:V.288, A:F.398 Hydrogen bonds: A:G.116, A:G.117, A:S.198, A:A.199 Salt bridges: A:H.438 LEA.30: 10 residues within 4Å: Chain B: G.116, G.117, S.198, A.199, W.231, L.286, V.288, F.398, H.438 Ligands: QRH.29 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:W.231, B:W.231, B:L.286, B:V.288, B:F.398 Hydrogen bonds: B:G.116, B:G.117, B:S.198, B:A.199 Salt bridges: B:H.438 LEA.50: 10 residues within 4Å: Chain C: G.116, G.117, S.198, A.199, W.231, L.286, V.288, F.398, H.438 Ligands: QRH.49 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:W.231, C:W.231, C:L.286, C:V.288, C:F.398 Hydrogen bonds: C:G.116, C:G.117, C:S.198, C:A.199 Salt bridges: C:H.438 LEA.70: 10 residues within 4Å: Chain D: G.116, G.117, S.198, A.199, W.231, L.286, V.288, F.398, H.438 Ligands: QRH.69 10 PLIP interactions: 10 interactions with chain D Hydrophobic interactions: D:W.231, D:W.231, D:L.286, D:V.288, D:F.398 Hydrogen bonds: D:G.116, D:G.117, D:S.198, D:A.199 Salt bridges: D:H.438 LEA.90: 10 residues within 4Å: Chain E: G.116, G.117, S.198, A.199, W.231, L.286, V.288, F.398, H.438 Ligands: QRH.89 10 PLIP interactions: 10 interactions with chain E Hydrophobic interactions: E:W.231, E:W.231, E:L.286, E:V.288, E:F.398 Hydrogen bonds: E:G.116, E:G.117, E:S.198, E:A.199 Salt bridges: E:H.438 LEA.110: 10 residues within 4Å: Chain F: G.116, G.117, S.198, A.199, W.231, L.286, V.288, F.398, H.438 Ligands: QRH.109 10 PLIP interactions: 10 interactions with chain F Hydrophobic interactions: F:W.231, F:W.231, F:L.286, F:V.288, F:F.398 Hydrogen bonds: F:G.116, F:G.117, F:S.198, F:A.199 Salt bridges: F:H.438 LEA.130: 10 residues within 4Å: Chain G: G.116, G.117, S.198, A.199, W.231, L.286, V.288, F.398, H.438 Ligands: QRH.129 10 PLIP interactions: 10 interactions with chain G Hydrophobic interactions: G:W.231, G:W.231, G:L.286, G:V.288, G:F.398 Hydrogen bonds: G:G.116, G:G.117, G:S.198, G:A.199 Salt bridges: G:H.438 LEA.150: 10 residues within 4Å: Chain H: G.116, G.117, S.198, A.199, W.231, L.286, V.288, F.398, H.438 Ligands: QRH.149 10 PLIP interactions: 10 interactions with chain H Hydrophobic interactions: H:W.231, H:W.231, H:L.286, H:V.288, H:F.398 Hydrogen bonds: H:G.116, H:G.117, H:S.198, H:A.199 Salt bridges: H:H.438

32 x CL: CHLORIDE ION(Non-functional Binders)

CL.11: 2 residues within 4Å: Chain A: W.376, Y.385 Ligand excluded by PLIP CL.12: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.13: 1 residues within 4Å: Chain A: R.515 Ligand excluded by PLIP CL.14: 3 residues within 4Å: Chain A: K.323, Y.420, R.515 Ligand excluded by PLIP CL.31: 2 residues within 4Å: Chain B: W.376, Y.385 Ligand excluded by PLIP CL.32: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.33: 1 residues within 4Å: Chain B: R.515 Ligand excluded by PLIP CL.34: 3 residues within 4Å: Chain B: K.323, Y.420, R.515 Ligand excluded by PLIP CL.51: 2 residues within 4Å: Chain C: W.376, Y.385 Ligand excluded by PLIP CL.52: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.53: 1 residues within 4Å: Chain C: R.515 Ligand excluded by PLIP CL.54: 3 residues within 4Å: Chain C: K.323, Y.420, R.515 Ligand excluded by PLIP CL.71: 2 residues within 4Å: Chain D: W.376, Y.385 Ligand excluded by PLIP CL.72: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.73: 1 residues within 4Å: Chain D: R.515 Ligand excluded by PLIP CL.74: 3 residues within 4Å: Chain D: K.323, Y.420, R.515 Ligand excluded by PLIP CL.91: 2 residues within 4Å: Chain E: W.376, Y.385 Ligand excluded by PLIP CL.92: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.93: 1 residues within 4Å: Chain E: R.515 Ligand excluded by PLIP CL.94: 3 residues within 4Å: Chain E: K.323, Y.420, R.515 Ligand excluded by PLIP CL.111: 2 residues within 4Å: Chain F: W.376, Y.385 Ligand excluded by PLIP CL.112: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.113: 1 residues within 4Å: Chain F: R.515 Ligand excluded by PLIP CL.114: 3 residues within 4Å: Chain F: K.323, Y.420, R.515 Ligand excluded by PLIP CL.131: 2 residues within 4Å: Chain G: W.376, Y.385 Ligand excluded by PLIP CL.132: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.133: 1 residues within 4Å: Chain G: R.515 Ligand excluded by PLIP CL.134: 3 residues within 4Å: Chain G: K.323, Y.420, R.515 Ligand excluded by PLIP CL.151: 2 residues within 4Å: Chain H: W.376, Y.385 Ligand excluded by PLIP CL.152: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.153: 1 residues within 4Å: Chain H: R.515 Ligand excluded by PLIP CL.154: 3 residues within 4Å: Chain H: K.323, Y.420, R.515 Ligand excluded by PLIP

32 x SO4: SULFATE ION(Non-functional Binders)

SO4.15: 5 residues within 4Å: Chain A: R.470, Q.486, S.487, T.488, T.508 Ligand excluded by PLIP SO4.16: 4 residues within 4Å: Chain A: Q.316, G.413, N.414, N.415 Ligand excluded by PLIP SO4.17: 3 residues within 4Å: Chain A: R.347, K.348, Q.351 Ligand excluded by PLIP SO4.18: 2 residues within 4Å: Chain A: K.45 Chain C: K.105 Ligand excluded by PLIP SO4.35: 5 residues within 4Å: Chain B: R.470, Q.486, S.487, T.488, T.508 Ligand excluded by PLIP SO4.36: 4 residues within 4Å: Chain B: Q.316, G.413, N.414, N.415 Ligand excluded by PLIP SO4.37: 3 residues within 4Å: Chain B: R.347, K.348, Q.351 Ligand excluded by PLIP SO4.38: 2 residues within 4Å: Chain B: K.45 Chain D: K.105 Ligand excluded by PLIP SO4.55: 5 residues within 4Å: Chain C: R.470, Q.486, S.487, T.488, T.508 Ligand excluded by PLIP SO4.56: 4 residues within 4Å: Chain C: Q.316, G.413, N.414, N.415 Ligand excluded by PLIP SO4.57: 3 residues within 4Å: Chain C: R.347, K.348, Q.351 Ligand excluded by PLIP SO4.58: 2 residues within 4Å: Chain B: K.105 Chain C: K.45 Ligand excluded by PLIP SO4.75: 5 residues within 4Å: Chain D: R.470, Q.486, S.487, T.488, T.508 Ligand excluded by PLIP SO4.76: 4 residues within 4Å: Chain D: Q.316, G.413, N.414, N.415 Ligand excluded by PLIP SO4.77: 3 residues within 4Å: Chain D: R.347, K.348, Q.351 Ligand excluded by PLIP SO4.78: 2 residues within 4Å: Chain A: K.105 Chain D: K.45 Ligand excluded by PLIP SO4.95: 5 residues within 4Å: Chain E: R.470, Q.486, S.487, T.488, T.508 Ligand excluded by PLIP SO4.96: 4 residues within 4Å: Chain E: Q.316, G.413, N.414, N.415 Ligand excluded by PLIP SO4.97: 3 residues within 4Å: Chain E: R.347, K.348, Q.351 Ligand excluded by PLIP SO4.98: 2 residues within 4Å: Chain E: K.45 Chain G: K.105 Ligand excluded by PLIP SO4.115: 5 residues within 4Å: Chain F: R.470, Q.486, S.487, T.488, T.508 Ligand excluded by PLIP SO4.116: 4 residues within 4Å: Chain F: Q.316, G.413, N.414, N.415 Ligand excluded by PLIP SO4.117: 3 residues within 4Å: Chain F: R.347, K.348, Q.351 Ligand excluded by PLIP SO4.118: 2 residues within 4Å: Chain F: K.45 Chain H: K.105 Ligand excluded by PLIP SO4.135: 5 residues within 4Å: Chain G: R.470, Q.486, S.487, T.488, T.508 Ligand excluded by PLIP SO4.136: 4 residues within 4Å: Chain G: Q.316, G.413, N.414, N.415 Ligand excluded by PLIP SO4.137: 3 residues within 4Å: Chain G: R.347, K.348, Q.351 Ligand excluded by PLIP SO4.138: 2 residues within 4Å: Chain F: K.105 Chain G: K.45 Ligand excluded by PLIP SO4.155: 5 residues within 4Å: Chain H: R.470, Q.486, S.487, T.488, T.508 Ligand excluded by PLIP SO4.156: 4 residues within 4Å: Chain H: Q.316, G.413, N.414, N.415 Ligand excluded by PLIP SO4.157: 3 residues within 4Å: Chain H: R.347, K.348, Q.351 Ligand excluded by PLIP SO4.158: 2 residues within 4Å: Chain E: K.105 Chain H: K.45 Ligand excluded by PLIP

16 x BR: BROMIDE ION(Non-covalent)

BR.19: 3 residues within 4Å: Chain A: F.525 Chain E: F.525 Ligands: BR.99 Ligand excluded by PLIP BR.20: 2 residues within 4Å: Chain A: R.242, V.288 Ligand excluded by PLIP BR.39: 3 residues within 4Å: Chain B: F.525 Chain F: F.525 Ligands: BR.119 Ligand excluded by PLIP BR.40: 2 residues within 4Å: Chain B: R.242, V.288 Ligand excluded by PLIP BR.59: 3 residues within 4Å: Chain C: F.525 Chain H: F.525 Ligands: BR.159 Ligand excluded by PLIP BR.60: 2 residues within 4Å: Chain C: R.242, V.288 Ligand excluded by PLIP BR.79: 3 residues within 4Å: Chain D: F.525 Chain G: F.525 Ligands: BR.139 Ligand excluded by PLIP BR.80: 2 residues within 4Å: Chain D: R.242, V.288 Ligand excluded by PLIP BR.99: 3 residues within 4Å: Chain A: F.525 Chain E: F.525 Ligands: BR.19 Ligand excluded by PLIP BR.100: 2 residues within 4Å: Chain E: R.242, V.288 Ligand excluded by PLIP BR.119: 3 residues within 4Å: Chain B: F.525 Chain F: F.525 Ligands: BR.39 Ligand excluded by PLIP BR.120: 2 residues within 4Å: Chain F: R.242, V.288 Ligand excluded by PLIP BR.139: 3 residues within 4Å: Chain D: F.525 Chain G: F.525 Ligands: BR.79 Ligand excluded by PLIP BR.140: 2 residues within 4Å: Chain G: R.242, V.288 Ligand excluded by PLIP BR.159: 3 residues within 4Å: Chain C: F.525 Chain H: F.525 Ligands: BR.59 Ligand excluded by PLIP BR.160: 2 residues within 4Å: Chain H: R.242, V.288 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chavarria, D. et al., Fine-Tuning the Biological Profile of Multitarget Mitochondriotropic Antioxidants for Neurodegenerative Diseases. Antioxidants (Basel) (2021)

Release Date

2021-06-09

Peptides

Cholinesterase: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

Cholinesterase

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