SMTL ID : 1p2u.1

H-Ras in 50% isopropanol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: S.17, T.35, D.57 Ligands: GNP.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.17, A:T.35, H2O.1, H2O.1

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.2: 24 residues within 4Å: Chain A: A.11, G.12, G.13, V.14, G.15, K.16, S.17, A.18, F.28, V.29, D.30, E.31, P.34, T.35, A.59, G.60, N.116, K.117, D.119, L.120, S.145, A.146, K.147 Ligands: MG.1 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:G.13, A:V.14, A:G.15, A:K.16, A:K.16, A:S.17, A:A.18, A:V.29, A:T.35, A:G.60, A:N.116, A:K.117, A:K.117, A:A.146, A:K.147 Water bridges: A:S.17, A:S.17, A:T.35, A:T.35, A:Q.61, A:Q.61 Salt bridges: A:D.119 pi-Stacking: A:F.28, A:F.28

3 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.3: 1 residues within 4Å: Chain A: Q.165 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Q.165 IPA.4: 2 residues within 4Å: Chain A: D.107, D.108 No protein-ligand interaction detected (PLIP) IPA.5: 1 residues within 4Å: Chain A: K.88 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:K.88 Hydrogen bonds: A:K.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Buhrman, G.K. et al., Organic solvents order the dynamic switch II in Ras crystals. Structure (2003)

Release Date

2003-08-05

Peptides

Transforming protein p21/H-RAS-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transforming protein p21/H-RAS-1

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