SMTL ID : 1s6q.1

CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R147681

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x TPB: 4-[4-(2,4,6-TRIMETHYL-PHENYLAMINO)-PYRIMIDIN-2-YLAMINO]-BENZONITRILE(Non-covalent)

TPB.1: 12 residues within 4Å: Chain A: P.95, L.100, K.101, K.103, V.106, V.179, Y.181, Y.188, F.227, L.234, H.235, Y.318 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:P.95, A:L.100, A:L.100, A:V.106, A:V.179, A:V.179, A:Y.181, A:Y.181, A:Y.188, A:Y.188, A:L.234, A:Y.318 Hydrogen bonds: A:K.101, A:K.101 pi-Stacking: A:Y.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Das, K. et al., Roles of Conformational and Positional Adaptability in Structure-Based Design of TMC125-R165335 (Etravirine) and Related Non-nucleoside Reverse Transcriptase Inhibitors That Are Highly Potent and Effective against Wild-Type and Drug-Resistant HIV-1 Variants. J.Med.Chem. (2004)

Release Date

2004-05-11

Peptides

POL polyprotein [Contains: Reverse transcriptase]: A
POL polyprotein [Contains: Reverse transcriptase]: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

POL polyprotein [Contains: Reverse transcriptase]

POL polyprotein [Contains: Reverse transcriptase]

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