SMTL ID : 1w3v.1

Isopenicillin N synthase d-(L-a-aminoadipoyl)-(3R)-methyl-L-cysteine D-a-hydroxyisovaleryl ester complex (anaerobic)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x FE2: FE (II) ION(Non-covalent)

FE2.1: 4 residues within 4Å: Chain A: H.214, D.216, H.270 Ligands: MDZ.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.214, A:D.216, A:H.270, H2O.8

1 x MDZ: N~6~-METHYL-6-OXO-L-LYSINE - 2-[(3-MERCAPTOBUTANOYL)OXY]-3-METHYLBUTANOIC ACID(Non-covalent)

MDZ.2: 18 residues within 4Å: Chain A: R.87, Y.91, C.104, S.183, I.187, Y.189, F.211, H.214, D.216, Q.225, V.272, S.281, P.283, F.285, L.321, L.324, T.331 Ligands: FE2.1 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.211, A:L.321, A:L.324 Hydrogen bonds: A:Y.91, A:S.183, A:Y.189, A:Q.225, A:S.281 Water bridges: A:Y.91, A:Y.91, A:Y.189, A:Y.189, A:R.279 Salt bridges: A:R.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Daruzzaman, A. et al., Unexpected Oxidation of a Depsipeptide Substrate Analogue in Crystalline Isopenicillin N Synthase. Chembiochem (2006)

Release Date

2005-12-07

Peptides

ISOPENICILLIN N SYNTHETASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ISOPENICILLIN N SYNTHETASE

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