SMTL ID : 2vcm.1

ISOPENICILLIN N SYNTHASE WITH SUBSTRATE ANALOGUE ASMCOV

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x FE2: FE (II) ION(Non-covalent)

FE2.1: 4 residues within 4Å: Chain A: H.214, D.216, H.270 Ligands: M11.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.214, A:D.216, A:H.270, H2O.188

1 x M11: N^6^-[(1R,2S)-1-({[(1R)-1-CARBOXY-2-METHYLPROPYL]OXY}CARBONYL)-2-SULFANYLPROPYL]-6-OXO-L-LYSINE(Non-covalent)

M11.2: 21 residues within 4Å: Chain A: R.87, Y.91, C.104, S.183, I.187, Y.189, F.211, H.214, D.216, L.223, Q.225, L.231, H.270, V.272, S.281, P.283, F.285, L.321, L.324, T.331 Ligands: FE2.1 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:F.211, A:L.223, A:L.231, A:F.285, A:L.321, A:L.324 Hydrogen bonds: A:S.183, A:Y.189, A:Q.225, A:S.281, A:S.281 Water bridges: A:Y.91, A:Y.91, A:Y.91, A:R.279, A:T.331 Salt bridges: A:R.87

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 1 residues within 4Å: Chain A: K.208 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.208 SO4.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ge, W. et al., Structural Studies on the Reaction of Isopenicillin N Synthase with a Sterically Demanding Depsipeptide Substrate Analogue. Chembiochem (2009)

Release Date

2008-11-04

Peptides

ISOPENICILLIN N SYNTHETASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ISOPENICILLIN N SYNTHETASE

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