SMTL ID : 2bnn.1

The structure of Hydroxypropylphosphonic acid epoxidase from S. wedmorenis in complex with fosfomycin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x FCN: FOSFOMYCIN(Non-covalent)

FCN.1: 11 residues within 4Å: Chain A: R.97, Y.105, L.120, N.135, H.138, E.142, H.180, F.182, A.195 Chain B: K.23 Ligands: ZN.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.120, A:A.195 Hydrogen bonds: A:R.97, A:R.97, A:Y.105, A:N.135 FCN.3: 9 residues within 4Å: Chain A: K.23 Chain B: Y.105, L.120, N.135, H.138, E.142, H.180, A.195 Ligands: ZN.4 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:L.120 Hydrogen bonds: B:Y.103, B:Y.105, B:N.135 FCN.5: 11 residues within 4Å: Chain C: R.97, Y.105, L.120, N.135, H.138, E.142, H.180, F.182, A.195 Chain D: K.23 Ligands: ZN.6 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:L.120, C:A.195 Hydrogen bonds: C:R.97, C:R.97, C:N.135 FCN.7: 9 residues within 4Å: Chain C: K.23 Chain D: Y.105, L.120, N.135, H.138, E.142, H.180, A.195 Ligands: ZN.8 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:L.120 Hydrogen bonds: D:Y.103, D:N.135

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: N.135, H.138, E.142, H.180 Ligands: FCN.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:H.138, A:E.142, A:H.180, FCN.1 ZN.4: 4 residues within 4Å: Chain B: H.138, E.142, H.180 Ligands: FCN.3 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Ligand interactions Metal complexes: B:H.138, B:E.142, B:H.180, FCN.3 ZN.6: 5 residues within 4Å: Chain C: N.135, H.138, E.142, H.180 Ligands: FCN.5 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Ligand interactions Metal complexes: C:H.138, C:E.142, C:H.180, FCN.5 ZN.8: 4 residues within 4Å: Chain D: H.138, E.142, H.180 Ligands: FCN.7 4 PLIP interactions: 3 interactions with chain D, 1 Ligand-Ligand interactions Metal complexes: D:H.138, D:E.142, D:H.180, FCN.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mcluskey, K. et al., Structure and Reactivity of Hydroxypropylphosphonic Acid Epoxidase in Fosfomycin Biosynthesis by a Cation- and Flavin-Dependent Mechanism. Proc.Natl.Acad.Sci.USA (2005)

Release Date

2005-10-05

Peptides

EPOXIDASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

EPOXIDASE

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