SMTL ID : 2fad.1 (2 other biounits)

Crystal structure of E. coli heptanoyl-ACP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 1 residues within 4Å: Chain A: S.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.1, A:S.1

7 x ZN: ZINC ION(Non-covalent)

ZN.2: 1 residues within 4Å: Chain A: E.5 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.5, A:E.5 ZN.3: 1 residues within 4Å: Chain A: E.21 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.21, H2O.2, H2O.4 ZN.4: 1 residues within 4Å: Chain A: D.35 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.35, H2O.3, H2O.5 ZN.5: 1 residues within 4Å: Chain A: D.56 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.56, H2O.1, H2O.1 ZN.6: 1 residues within 4Å: Chain A: E.48 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.48 ZN.7: 1 residues within 4Å: Chain A: A.77 No protein-ligand interaction detected (PLIP) ZN.8: 2 residues within 4Å: Chain A: E.57, E.60 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.57, A:E.57, A:E.60, A:E.60

1 x PM5: S-(2-{[N-(2-HYDROXY-4-{[HYDROXY(OXIDO)PHOSPHINO]OXY}-3,3-DIMETHYLBUTANOYL)-BETA-ALANYL]AMINO}ETHYL) HEPTANETHIOATE(Covalent)

PM5.9: 16 residues within 4Å: Chain A: F.28, V.29, D.35, S.36, T.39, L.42, V.43, L.46, E.47, T.52, I.54, A.59, E.60, I.62, Y.71, I.72 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.46, A:L.46, A:T.52, A:I.54, A:Y.71, A:Y.71, A:I.72 Hydrogen bonds: A:D.35, A:A.59 Water bridges: A:S.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roujeinikova, A. et al., Structural Studies of Fatty Acyl-(Acyl Carrier Protein) Thioesters Reveal a Hydrophobic Binding Cavity that Can Expand to Fit Longer Substrates. J.Mol.Biol. (2007)

Release Date

2006-09-26

Peptides

Acyl carrier protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Acyl carrier protein

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