SMTL ID : 2i66.2 (1 other biounit)

Structural Basis for the Mechanistic Understanding Human CD38 Controlled Multiple Catalysis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x G1R: [(2R,3R,4R,5R)-5-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4R,5S)-3,4,5-TRIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE(Non-covalent)

G1R.1: 12 residues within 4Å: Chain A: W.87, R.89, I.90, K.91, L.107, E.108, D.117, V.147, W.151, R.174, T.183 Ligands: G2R.2 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:K.91, A:K.91, A:K.91, A:D.92, A:R.174, A:T.183 Water bridges: A:D.117, A:D.117 Salt bridges: A:R.89, A:R.89, A:E.108, A:D.117 pi-Stacking: A:W.151, A:W.151, A:W.151 pi-Cation interactions: A:W.151

1 x G2R: [(2R,3R,4R,5R)-5-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE(Non-covalent)

G2R.2: 16 residues within 4Å: Chain A: L.86, W.87, S.88, R.89, L.107, E.108, W.138, S.148, S.155, D.179, D.181, S.182, T.183, F.184, E.188 Ligands: G1R.1 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:W.87, A:W.87, A:R.89, A:S.148, A:S.148, A:D.179, A:T.183, A:F.184 Water bridges: A:L.107, A:N.145 Salt bridges: A:R.89 pi-Stacking: A:W.138, A:W.138, A:W.138 pi-Cation interactions: A:W.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Q. et al., Structural basis for the mechanistic understanding of human CD38-controlled multiple catalysis. J.Biol.Chem. (2006)

Release Date

2006-09-05

Peptides

ADP-ribosyl cyclase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

ADP-ribosyl cyclase 1

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