SMTL ID : 3i9m.1 (1 other biounit)

Crystal structure of human CD38 complexed with an analog ara-2'F-ADPR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x AVU: [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3R,4R)-4-fluoro-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate(Covalent)

AVU.1: 14 residues within 4Å: Chain A: W.87, S.88, R.89, K.91, E.108, D.117, D.118, S.148, W.151, S.155, S.182, T.183, F.184, E.188 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:R.89, A:D.117, A:D.118, A:T.183, A:T.183, A:F.184 Water bridges: A:W.87, A:R.89, A:R.89, A:K.91, A:K.91, A:L.119, A:L.119, A:K.152 Salt bridges: A:R.89, A:R.89 pi-Stacking: A:W.151, A:W.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Q. et al., Structural basis for enzymatic evolution from a dedicated ADP-ribosyl cyclase to a multifunctional NAD hydrolase. J.Biol.Chem. (2009)

Release Date

2009-07-28

Peptides

ADP-ribosyl cyclase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADP-ribosyl cyclase 1

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