SMTL ID : 2ohk.1

X-ray crystal structure of beta secretase complexed with 1-amino-isoquinoline

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

3 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 4 residues within 4Å: Chain A: H.62, T.120, E.121, S.122 Ligand excluded by PLIP IOD.2: 2 residues within 4Å: Chain A: H.62, K.124 Ligand excluded by PLIP IOD.3: 2 residues within 4Å: Chain A: R.366, R.368 Ligand excluded by PLIP

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 3 residues within 4Å: Chain A: R.113, N.115, E.151 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.115 Water bridges: A:N.115, A:N.115, A:S.156 Salt bridges: A:E.151

1 x 1SQ: ISOQUINOLIN-1-AMINE(Non-covalent)

1SQ.5: 10 residues within 4Å: Chain A: D.49, G.51, S.52, Y.88, T.89, I.135, D.245, G.247, T.248, R.252 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.88 Hydrogen bonds: A:S.52, A:D.245

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murray, C.W. et al., Application of fragment screening by X-ray crystallography to beta-Secretase. J.Med.Chem. (2007)

Release Date

2007-03-13

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

Related Entries With Identical Sequence