- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.90 Å
- Oligo State
- homo-dimer
- Ligands
- 20 x SO4: SULFATE ION(Non-functional Binders)
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
SAH.11: 21 residues within 4Å:- Chain A: S.65, G.67, G.90, C.91, G.92, R.93, G.94, G.95, W.96, T.113, K.114, H.119, E.120, V.139, D.140, V.141, F.142, D.155, I.156
- Ligands: SO4.1, SO4.9
13 PLIP interactions:13 interactions with chain A- Hydrogen bonds: A:S.65, A:G.67, A:R.93, A:G.94, A:G.95, A:W.96, A:W.96, A:K.114, A:G.115, A:H.119, A:D.140, A:V.141
- pi-Cation interactions: A:K.114
SAH.23: 21 residues within 4Å:- Chain B: S.65, G.67, G.90, C.91, G.92, R.93, G.94, G.95, W.96, T.113, K.114, H.119, E.120, V.139, D.140, V.141, F.142, D.155, I.156
- Ligands: SO4.13, SO4.21
14 PLIP interactions:14 interactions with chain B- Hydrogen bonds: B:S.65, B:G.67, B:R.93, B:G.94, B:G.95, B:W.96, B:W.96, B:K.114, B:G.115, B:H.119, B:D.140, B:V.141, B:D.155
- pi-Cation interactions: B:K.114
- 2 x 5GP: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)
5GP.12: 10 residues within 4Å:- Chain A: K.23, L.26, N.27, L.29, F.34, K.38, S.159, S.160, P.161, S.223
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:K.23, A:N.27, A:L.29, A:L.29, A:L.29, A:S.159, A:S.159, A:S.223
- Salt bridges: A:K.38
- pi-Stacking: A:F.34, A:F.34
5GP.24: 10 residues within 4Å:- Chain B: K.23, L.26, N.27, L.29, F.34, K.38, S.159, S.160, P.161, S.223
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:K.23, B:N.27, B:L.29, B:L.29, B:L.29, B:S.159, B:S.159, B:S.223
- Salt bridges: B:K.38
- pi-Stacking: B:F.34, B:F.34
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Egloff, M.P. et al., An RNA cap (nucleoside-2'-O)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization. EMBO J. (2002)
- Release Date
- 2007-03-20
- Peptides
- type II methyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.90 Å
- Oligo State
- homo-dimer
- Ligands
- 20 x SO4: SULFATE ION(Non-functional Binders)
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
- 2 x 5GP: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Egloff, M.P. et al., An RNA cap (nucleoside-2'-O)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization. EMBO J. (2002)
- Release Date
- 2007-03-20
- Peptides
- type II methyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A