SMTL ID : 2p3u.1

Crystal structure of human factor XA complexed with 3-chloro-N-(4-chloro-2-{[(5-chloropyridin-2-yl)amino]carbonyl}-6-methoxyphenyl)-4-[(1-methyl-1H-imidazol-2-yl)methyl]thiophene-2-carboxamide {Pfizer 320663}

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain B: D.56, N.58, Q.61, E.63, E.66 6 PLIP interactions: 5 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.56, B:N.58, B:Q.61, B:E.63, B:E.66, H2O.6 CA.2: 4 residues within 4Å: Chain B: Y.173, D.174, R.211, K.214 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:Y.173, B:D.174, B:R.211, H2O.7, H2O.10

1 x 663: 3-CHLORO-N-(4-CHLORO-2-{[(5-CHLOROPYRIDIN-2-YL)AMINO]CARBONYL}-6-METHOXYPHENYL)-4-[(1-METHYL-1H-IMIDAZOL-2-YL)METHYL]THIOPHENE-2-CARBOXAMIDE(Non-covalent)

663.3: 21 residues within 4Å: Chain B: K.82, E.83, T.84, Y.85, R.132, E.135, F.162, D.179, A.180, C.181, Q.182, V.203, S.204, W.205, G.206, E.207, G.208, C.209, G.216, I.217, Y.218 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:Y.85, B:A.180, B:Q.182, B:W.205, B:W.205 Hydrogen bonds: B:G.206, B:G.208, B:G.208 Water bridges: B:S.185 Halogen bonds: B:R.132, B:E.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

 - 

Release Date

2007-09-11

Peptides

Coagulation factor X: A
Coagulation factor X: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Coagulation factor X

Coagulation factor X

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