SMTL ID : 2pxr.2 (2 other biounits)

Crystal Structure of HIV-1 CA146 in the Presence of CAP-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: Q.50, T.110, L.111 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain B: Q.50, T.110, L.111 Ligand excluded by PLIP

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: H.87 Chain B: H.84, E.98 5 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:H.84, B:E.98, B:E.98, A:H.87, H2O.5 ZN.3: 3 residues within 4Å: Chain A: H.120 Chain B: H.120 Ligands: ZN.6 4 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: A:H.120, B:H.120, H2O.7, H2O.14 ZN.5: 3 residues within 4Å: Chain A: H.84, E.98 Chain B: H.87 5 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:H.87, A:H.84, A:E.98, A:E.98, H2O.11 ZN.6: 3 residues within 4Å: Chain A: H.120 Chain B: H.120 Ligands: ZN.3 4 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: A:H.120, B:H.120, H2O.7, H2O.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kelly, B.N. et al., Structure of the Antiviral Assembly Inhibitor CAP-1 Complex with the HIV-1 CA Protein. J.Mol.Biol. (2007)

Release Date

2007-09-25

Peptides

Gag-Pol polyprotein (Pr160Gag-Pol): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
C

Gag-Pol polyprotein (Pr160Gag-Pol)

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