SMTL ID : 3dji.1 (1 other biounit)

Crystal Structure of Macrophage Migration Inhibitory Factor Bound to an Acetaminophen Dimer Derived from NAPQI

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-trimer

Ligands

9 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: G.68, G.69, A.70, Q.71 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: M.101, N.102, N.105 Ligand excluded by PLIP CL.3: 1 residues within 4Å: Chain A: R.11 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain B: G.68, G.69, A.70, Q.71 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain B: P.15, G.17, F.18, L.19 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain B: M.101, N.102, N.105 Ligand excluded by PLIP CL.8: 4 residues within 4Å: Chain C: G.68, G.69, A.70, Q.71 Ligand excluded by PLIP CL.9: 3 residues within 4Å: Chain C: M.101, N.102, N.105 Ligand excluded by PLIP CL.10: 1 residues within 4Å: Chain C: Q.35 Ligand excluded by PLIP

1 x 3E1: N,N'-(6,6'-dihydroxybiphenyl-3,3'-diyl)diacetamide(Non-covalent)

3E1.4: 6 residues within 4Å: Chain A: Y.95 Chain B: P.1, K.32, P.33, Y.36, F.113 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:P.33, B:Y.36, B:F.113 Hydrogen bonds: B:Y.36, B:Y.36 Water bridges: B:K.32, B:K.32, B:I.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crichlow, G.V. et al., Structural and kinetic analyses of macrophage migration inhibitory factor active site interactions. Biochemistry (2009)

Release Date

2008-12-23

Peptides

Macrophage migration inhibitory factor: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Macrophage migration inhibitory factor

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