- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.37 Å
- Oligo State
- homo-trimer
- Ligands
- 4 x 6DQ: 2-pyridin-3-yl-1,3-benzothiazin-4-one(Non-covalent)
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 9 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 4 residues within 4Å:- Chain A: G.68, G.69, A.70, Q.71
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.69, A:A.70, A:Q.71, A:Q.71
SO4.4: 2 residues within 4Å:- Chain A: A.70, R.73
2 PLIP interactions:2 interactions with chain A- Water bridges: A:R.73
- Salt bridges: A:R.73
SO4.5: 1 residues within 4Å:- Chain A: K.77
No protein-ligand interaction detected (PLIP)SO4.6: 5 residues within 4Å:- Chain A: Q.45
- Chain B: V.42, Q.45
- Chain C: V.42, Q.45
4 PLIP interactions:2 interactions with chain B, 1 interactions with chain C, 1 interactions with chain A- Hydrogen bonds: B:Q.45, C:Q.45, A:Q.45
- Water bridges: B:Q.45
SO4.7: 6 residues within 4Å:- Chain A: H.62, Y.99
- Chain B: H.62, Y.99
- Chain C: H.62, Y.99
11 PLIP interactions:3 interactions with chain A, 5 interactions with chain C, 3 interactions with chain B- Water bridges: A:H.62, A:Y.99, C:S.60, C:S.60, C:H.62, C:H.62, B:Y.99
- Salt bridges: A:H.62, C:H.62, B:H.62
- Hydrogen bonds: B:Y.99
SO4.10: 1 residues within 4Å:- Chain B: S.53
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:S.53
- Water bridges: B:S.53
SO4.11: 2 residues within 4Å:- Chain B: P.15, D.16
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:D.16
SO4.12: 4 residues within 4Å:- Chain B: G.68, G.69, A.70, Q.71
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:G.69, B:A.70, B:Q.71
SO4.14: 4 residues within 4Å:- Chain C: G.68, G.69, A.70, Q.71
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:G.69, C:A.70, C:Q.71, C:Q.71
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kimura, H. et al., BTZO-1, a cardioprotective agent, reveals that macrophage migration inhibitory factor regulates ARE-mediated gene expression. Chem. Biol. (2010)
- Release Date
- 2016-04-20
- Peptides
- Macrophage migration inhibitory factor: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.37 Å
- Oligo State
- homo-trimer
- Ligands
- 4 x 6DQ: 2-pyridin-3-yl-1,3-benzothiazin-4-one(Non-covalent)
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 9 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kimura, H. et al., BTZO-1, a cardioprotective agent, reveals that macrophage migration inhibitory factor regulates ARE-mediated gene expression. Chem. Biol. (2010)
- Release Date
- 2016-04-20
- Peptides
- Macrophage migration inhibitory factor: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C