SMTL ID : 3mb4.1 (1 other biounit)

Crystal Structure of the fifth Bromodomain of Human Poly-bromodomain containing protein 1 (PB1) with NMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 1 residues within 4Å: Chain A: Q.77 1 PLIP interactions: 1 interactions with chain A Water bridges: A:N.74 EDO.2: 3 residues within 4Å: Chain A: S.101, L.102, I.103 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.102, A:I.103 Water bridges: A:S.101

1 x MB3: 1-methylpyrrolidin-2-one(Non-covalent)

MB3.3: 6 residues within 4Å: Chain A: L.45, P.46, L.51, Y.54, Y.96, N.97 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.51, A:Y.96 Hydrogen bonds: A:N.97

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 2 residues within 4Å: Chain A: V.113, E.116 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Histone recognition and large-scale structural analysis of the human bromodomain family. Cell(Cambridge,Mass.) (2012)

Release Date

2010-04-14

Peptides

Protein polybromo-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein polybromo-1

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