SMTL ID : 5fh7.1 (1 other biounit)

Crystal structure of the fifth bromodomain of human PB1 in complex with compound 18

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: Y.55, L.56, T.57, I.58, K.59 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.55 EDO.2: 5 residues within 4Å: Chain A: Y.30, V.109, K.112, V.113, E.116 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.30, A:V.109

1 x 5XL: 6-chloranyl-3-[(dimethylamino)methyl]-4~{H}-pyrrolo[1,2-a]quinazolin-5-one(Non-covalent)

5XL.3: 12 residues within 4Å: Chain A: I.41, F.42, L.45, P.46, L.51, Y.54, M.62, M.89, A.93, Y.96, N.97, I.103 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.41, A:L.45, A:I.103 Hydrogen bonds: A:N.97 pi-Stacking: A:F.42 Halogen bonds: A:M.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sutherell, C.L. et al., Identification and Development of 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-one Inhibitors Targeting Bromodomains within the Switch/Sucrose Nonfermenting Complex. J.Med.Chem. (2016)

Release Date

2016-06-01

Peptides

Protein polybromo-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein polybromo-1

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