SMTL ID : 6zs3.2 (1 other biounit)

Crystal structure of the fifth bromodomain of human protein polybromo-1 in complex with 2-(6-amino-5-(piperazin-1-yl)pyridazin-3-yl)phenol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

1 x FX5: 2-(6-azanyl-5-piperazin-4-ium-1-yl-pyridazin-3-yl)phenol(Non-covalent)

FX5.1: 12 residues within 4Å: Chain A: I.41, F.42, L.45, L.51, Y.54, M.62, D.63, M.89, A.93, Y.96, N.97, I.103 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.45, A:D.63 Hydrogen bonds: A:N.97, A:N.97 pi-Stacking: A:F.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wanior, M. et al., Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis. J.Med.Chem. (2020)

Release Date

2020-10-07

Peptides

Protein polybromo-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protein polybromo-1

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