SMTL ID : 3mxs.1

SHV-1 beta-lactamase complex with compound 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.24 Å

Oligo State

monomer

Ligands

1 x CZ9: N-[(dihydroxyboranyl)methyl]-Nalpha-[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]-D-tyrosinamide(Covalent)

CZ9.1: 12 residues within 4Å: Chain A: M.44, S.45, K.48, N.107, E.141, T.142, L.144, N.145, G.211, A.212, G.213, E.214 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.45, A:N.107, A:T.142, A:N.145, A:N.145, A:A.212, A:A.212, A:A.212

2 x MA4: CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE(Non-covalent)

MA4.2: 13 residues within 4Å: Chain A: I.196, V.199, P.201, I.206, I.220, A.222, V.234, I.236, I.252, A.253, A.257, I.260, E.261 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.196, A:V.199, A:I.206, A:I.220, A:A.222, A:V.234, A:I.236, A:I.252 Hydrogen bonds: A:E.261 MA4.3: 8 residues within 4Å: Chain A: A.192, L.195, T.210, R.218, I.220, N.249, I.252, A.253 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.192, A:L.195, A:T.210, A:I.220, A:I.252, A:A.253

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ke, W. et al., Novel Insights into the Mode of Inhibition of Class A SHV-1 {beta}-Lactamases Revealed by Boronic Acid Transition State Inhibitors. Antimicrob.Agents Chemother. (2011)

Release Date

2010-11-24

Peptides

Beta-lactamase SHV-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase SHV-1

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