SMTL ID : 3ozj.1

Crystal structure of human retinoic X receptor alpha complexed with bigelovin and coactivator SRC-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-2-2-mer

Ligands

2 x BGV: (3aR,4S,4aR,7aR,8R,9aS)-4a,8-dimethyl-3-methylidene-2,5-dioxo-2,3,3a,4,4a,5,7a,8,9,9a-decahydroazuleno[6,5-b]furan-4-yl acetate(Non-covalent)

BGV.1: 8 residues within 4Å: Chain A: I.44, I.86, F.89, V.118, F.122, C.208, H.211, L.212 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.44, A:I.86, A:F.89, A:V.118, A:F.122, A:H.211, A:L.212, A:L.212 BGV.2: 10 residues within 4Å: Chain C: I.44, I.86, F.89, V.118, I.121, V.125, C.208, H.211, L.212, F.215 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:I.44, C:I.86, C:V.118, C:V.125, C:H.211, C:L.212, C:F.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H. et al., Structure basis of bigelovin as a selective RXR agonist with a distinct binding mode. J.Mol.Biol. (2011)

Release Date

2011-02-02

Peptides

Retinoic acid receptor RXR-alpha: AC
SRC-1, peptide of Nuclear receptor coactivator 2: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Retinoic acid receptor RXR-alpha

SRC-1, peptide of Nuclear receptor coactivator 2

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