SMTL ID : 3vdd.4 (3 other biounits)

Structure of HRV2 capsid complexed with antiviral compound BTA798

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x BT8: 3-ethoxy-6-{2-[1-(6-methylpyridazin-3-yl)piperidin-4-yl]ethoxy}-1,2-benzoxazole(Non-covalent)

BT8.1: 17 residues within 4Å: Chain A: I.99, L.101, S.121, I.123, Y.143, M.144, Y.145, A.167, F.180, L.182, Y.191, Y.192, T.207, N.211, M.213, L.216, H.237 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.99, A:I.99, A:I.123, A:Y.145, A:Y.145, A:Y.145, A:L.182, A:Y.191, A:T.207, A:N.211 Hydrogen bonds: A:L.101 pi-Stacking: A:F.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Feil, S.C. et al., An Orally Available 3-Ethoxybenzisoxazole Capsid Binder with Clinical Activity against Human Rhinovirus. ACS Med Chem Lett (2012)

Release Date

2012-09-12

Peptides

Protein VP1: A
Protein VP2: B
Protein VP3: C
Protein VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Protein VP1

Protein VP2

Protein VP3

Protein VP4

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