SMTL ID : 4duh.1 (1 other biounit)

Crystal structure of 24 kDa domain of E. coli DNA gyrase B in complex with small molecule inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x RLI: 4-{[4'-methyl-2'-(propanoylamino)-4,5'-bi-1,3-thiazol-2-yl]amino}benzoic acid(Non-covalent)

RLI.1: 17 residues within 4Å: Chain A: V.43, N.46, A.47, E.50, V.71, D.73, R.76, G.77, I.78, P.79, I.94, G.101, K.103, V.120, R.136, T.165, V.167 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.43, A:A.47, A:E.50, A:P.79, A:V.167 Hydrogen bonds: A:D.73, A:G.101, A:T.165 Water bridges: A:R.136 Salt bridges: A:R.76, A:R.136 pi-Cation interactions: A:K.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brvar, M. et al., Structure-based discovery of substituted 4,5'-bithiazoles as novel DNA gyrase inhibitors. J.Med.Chem. (2012)

Release Date

2012-08-01

Peptides

DNA gyrase subunit B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA gyrase subunit B

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