SMTL ID : 7p2x.1

E.coli GyrB24 with inhibitor KOB20 (EBL2583)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x 4Q6: (2Z)-2-[[4,5-bis(bromanyl)-1H-pyrrol-2-yl]carbonylimino]-3-(phenylmethyl)-1,3-benzothiazole-6-carboxylic acid(Non-covalent)

4Q6.1: 13 residues within 4Å: Chain A: N.46, E.50, V.71, D.73, R.76, G.77, I.78, P.79, I.94, V.120, R.136, T.165, V.167 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:N.46, A:R.76, A:I.78, A:I.78, A:P.79, A:I.94 Hydrogen bonds: A:D.73, A:T.165 Water bridges: A:R.136, A:R.136, A:R.136, A:R.136 Salt bridges: A:R.76, A:R.136 pi-Cation interactions: A:R.76 Halogen bonds: A:V.71

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: P.79, T.80, G.81, R.136, E.137 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.80, A:G.81, A:E.137 Water bridges: A:G.81, A:R.136 Salt bridges: A:R.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stevenson, C.E.M. et al., E.coli GyrB24 with inhibitor KOB20 (EBL2583). TO BE PUBLISHED

Release Date

2022-07-20

Peptides

DNA gyrase subunit B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA gyrase subunit B

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