- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.49 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 16 x MG: MAGNESIUM ION(Non-covalent)
MG.1: 5 residues within 4Å:- Chain A: T.17, Y.128, R.131, A.132, M.134
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:T.17, A:Y.128, A:R.131, A:M.134, H2O.3
MG.2: 4 residues within 4Å:- Chain 3: L.34
- Chain H: I.163, D.166, S.169
4 PLIP interactions:3 interactions with chain H, 1 Ligand-Water interactions- Metal complexes: H:I.163, H:D.166, H:S.169, H2O.15
MG.3: 7 residues within 4Å:- Chain 2: D.222
- Chain I: R.19, G.162, I.163, D.166, L.167, S.169
5 PLIP interactions:3 interactions with chain I, 1 interactions with chain 2, 1 Ligand-Water interactions- Metal complexes: I:I.163, I:D.166, I:S.169, 2:D.222, H2O.16
MG.4: 3 residues within 4Å:- Chain J: A.175, D.178, S.181
4 PLIP interactions:3 interactions with chain J, 1 Ligand-Water interactions- Metal complexes: J:A.175, J:D.178, J:S.181, H2O.18
MG.5: 2 residues within 4Å:- Chain J: G.140, S.143
4 PLIP interactions:2 interactions with chain J, 2 Ligand-Water interactions- Metal complexes: J:G.140, J:S.143, H2O.20, H2O.20
MG.7: 6 residues within 4Å:- Chain L: R.19, A.165, D.168, A.169, S.171
- Chain Z: D.205
4 PLIP interactions:3 interactions with chain L, 1 interactions with chain Z- Metal complexes: L:A.165, L:D.168, L:S.171, Z:D.205
MG.8: 6 residues within 4Å:- Chain M: R.28, T.192, H.195, I.196, V.198, D.222
4 PLIP interactions:3 interactions with chain M, 1 Ligand-Water interactions- Metal complexes: M:T.192, M:H.195, M:V.198, H2O.26
MG.9: 3 residues within 4Å:- Chain E: E.106
- Chain M: S.85, S.88
6 PLIP interactions:2 interactions with chain M, 1 interactions with chain E, 3 Ligand-Water interactions- Metal complexes: M:S.85, M:S.88, E:E.106, H2O.26, H2O.26, H2O.27
MG.10: 5 residues within 4Å:- Chain Q: T.17, Y.128, R.131, A.132, M.134
5 PLIP interactions:4 interactions with chain Q, 1 Ligand-Water interactions- Metal complexes: Q:T.17, Q:Y.128, Q:R.131, Q:M.134, H2O.35
MG.11: 4 residues within 4Å:- Chain N: L.34
- Chain X: I.163, D.166, S.169
4 PLIP interactions:3 interactions with chain X, 1 Ligand-Water interactions- Metal complexes: X:I.163, X:D.166, X:S.169, H2O.48
MG.12: 7 residues within 4Å:- Chain M: D.222
- Chain Y: R.19, G.162, I.163, D.166, L.167, S.169
5 PLIP interactions:3 interactions with chain Y, 1 interactions with chain M, 1 Ligand-Water interactions- Metal complexes: Y:I.163, Y:D.166, Y:S.169, M:D.222, H2O.49
MG.13: 3 residues within 4Å:- Chain Z: A.175, D.178, S.181
4 PLIP interactions:3 interactions with chain Z, 1 Ligand-Water interactions- Metal complexes: Z:A.175, Z:D.178, Z:S.181, H2O.51
MG.14: 2 residues within 4Å:- Chain Z: G.140, S.143
4 PLIP interactions:2 interactions with chain Z, 2 Ligand-Water interactions- Metal complexes: Z:G.140, Z:S.143, H2O.52, H2O.53
MG.16: 6 residues within 4Å:- Chain 1: R.19, A.165, D.168, A.169, S.171
- Chain J: D.205
4 PLIP interactions:3 interactions with chain 1, 1 interactions with chain J- Metal complexes: 1:A.165, 1:D.168, 1:S.171, J:D.205
MG.17: 6 residues within 4Å:- Chain 2: R.28, T.192, H.195, I.196, V.198, D.222
4 PLIP interactions:3 interactions with chain 2, 1 Ligand-Water interactions- Metal complexes: 2:T.192, 2:H.195, 2:V.198, H2O.58
MG.18: 3 residues within 4Å:- Chain 2: S.85, S.88
- Chain U: E.106
6 PLIP interactions:2 interactions with chain 2, 1 interactions with chain U, 3 Ligand-Water interactions- Metal complexes: 2:S.85, 2:S.88, U:E.106, H2O.58, H2O.59, H2O.60
- 2 x LDZ: N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-4-methyl-1-oxopentan-2-yl]-L-leucinamide(Non-covalent)
LDZ.6: 14 residues within 4Å:- Chain L: T.1, R.19, A.20, T.21, A.27, K.33, M.45, A.46, G.47, G.48, A.49
- Chain M: P.104, D.126, P.127
12 PLIP interactions:9 interactions with chain L, 3 interactions with chain M- Hydrophobic interactions: L:A.20, L:A.27, L:M.45, M:P.104, M:P.127
- Hydrogen bonds: L:T.21, L:T.21, L:G.47, L:G.47, L:A.49, M:D.126
- Water bridges: L:A.50
LDZ.15: 14 residues within 4Å:- Chain 1: T.1, R.19, A.20, T.21, A.27, K.33, M.45, A.46, G.47, G.48, A.49
- Chain 2: P.104, D.126, P.127
14 PLIP interactions:4 interactions with chain 2, 10 interactions with chain 1- Hydrophobic interactions: 2:P.104, 2:P.127, 1:A.20, 1:A.27, 1:M.45
- Hydrogen bonds: 2:D.126, 2:D.126, 1:T.1, 1:T.21, 1:T.21, 1:G.47, 1:G.47, 1:A.49
- Water bridges: 1:A.50
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Stadtmueller, B.M. et al., Structure of a Proteasome Pba1-Pba2 Complex: IMPLICATIONS FOR PROTEASOME ASSEMBLY, ACTIVATION, AND BIOLOGICAL FUNCTION. J.Biol.Chem. (2012)
- Release Date
- 2012-09-05
- Peptides
- Proteasome component C7-alpha: AQ
Proteasome component Y7: BR
Proteasome component Y13: CS
Proteasome component PRE6: DT
Proteasome component PUP2: EU
Proteasome component PRE5: FV
Proteasome component C1: GW
Proteasome component PRE3: HX
Proteasome component PUP1: IY
Proteasome component PUP3: JZ
Proteasome component C11: K0
Proteasome component PRE2: L1
Proteasome component C5: M2
Proteasome component PRE4: N3
Proteasome chaperone 1: O4
Proteasome assembly chaperone 2: P5 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AQ
AB
BR
BC
CS
CD
DT
DE
EU
EF
FV
FG
GW
GH
HX
HI
IY
IJ
JZ
JK
K0
KL
L1
LM
M2
MN
N3
NO
O4
OP
P5
P
SMTL ID : 4g4s.1
Structure of Proteasome-Pba1-Pba2 Complex
Proteasome component C7-alpha
Toggle Identical (AQ)Proteasome component Y7
Toggle Identical (BR)Proteasome component Y13
Toggle Identical (CS)Proteasome component PRE6
Toggle Identical (DT)Proteasome component PUP2
Toggle Identical (EU)Proteasome component PRE5
Toggle Identical (FV)Proteasome component C1
Toggle Identical (GW)Proteasome component PRE3
Toggle Identical (HX)Proteasome component PUP1
Toggle Identical (IY)Proteasome component PUP3
Toggle Identical (JZ)Proteasome component C11
Toggle Identical (K0)Proteasome component PRE2
Toggle Identical (L1)Proteasome component C5
Toggle Identical (M2)Proteasome component PRE4
Toggle Identical (N3)Proteasome chaperone 1
Toggle Identical (O4)Proteasome assembly chaperone 2
Toggle Identical (P5)Related Entries With Identical Sequence
1fnt.1 | 1g0u.1 | 1g65.1 | 1jd2.1 | 1ryp.1 | 1z7q.1 | 2f16.1 | 2fak.1 | 2gpl.1 | 2zcy.1 | 3bdm.1 | 3d29.1 | 3dy3.1 | 3dy4.1 | 3e47.1 | 3gpj.1 | 3gpt.1 | 3gpw.1 | 3hye.1 | 3jco.1 | 3jcp.1 | 3mg0.1 | 3mg4.1 | 3mg6.1 | 3mg7.1 | 3mg8.1 | 3nzj.1 | 3nzw.1 | 3nzx.1 | 3oeu.1 more...less...3oev.1 | 3okj.1 | 3sdi.1 | 3sdk.1 | 3shj.1 | 3tdd.1 | 3un4.1 | 3un8.1 | 3wxr.1 | 4cr2.1 | 4cr3.1 | 4cr4.1 | 4eu2.1 | 4fzc.1 | 4fzg.1 | 4gk7.1 | 4hnp.1 | 4hrc.1 | 4hrd.1 | 4inr.1 | 4int.1 | 4inu.1 | 4j70.1 | 4jsq.1 | 4jsu.1 | 4jt0.1 | 4lqi.1 | 4ltc.1 | 4nnn.1 | 4nnw.1 | 4no1.1 | 4no6.1 | 4no8.1 | 4no9.1 | 4q1s.1 | 4qby.1 | 4qlq.1 | 4qls.1 | 4qlt.1 | 4qlu.1 | 4qlv.1 | 4qux.1 | 4quy.1 | 4qv0.1 | 4qv1.1 | 4qv3.1 | 4qv4.1 | 4qv5.1 | 4qv6.1 | 4qv7.1 | 4qv8.1 | 4qv9.1 | 4qvl.1 | 4qvm.1 | 4qvn.1 | 4qvp.1 | 4qvq.1 | 4qvv.1 | 4qvw.1 | 4qvy.1 | 4qw0.1 | 4qw1.1 | 4qw3.1 | 4qw4.1 | 4qw5.1 | 4qw6.1 | 4qw7.1 | 4qwf.1 | 4qwg.1 | 4qwi.1 | 4qwj.1 | 4qwk.1 | 4qwl.1 | 4qwr.1 | 4qws.1 | 4qwu.1 | 4qwx.1 | 4qxj.1 | 4qz0.1 | 4qz1.1 | 4qz2.1 | 4qz3.1 | 4qz4.1 | 4qz5.1 | 4qz6.1 | 4qz7.1 | 4qzw.1 | 4qzx.1 | 4qzz.1 | 4r00.1 | 4r02.1 | 4r17.1 | 4r18.1 | 4rur.1 | 4v7o.1 | 4v7o.2 | 4x6z.1 | 4y69.1 | 4y6a.1 | 4y6v.1 | 4y6z.1 | 4y70.1 | 4y74.1 | 4y75.1 | 4y77.1 | 4y78.1 | 4y7w.1 | 4y7x.1 | 4y7y.1 | 4y80.1 | 4y81.1 | 4y82.1 | 4y84.1 | 4y8g.1 | 4y8h.1 | 4y8i.1 | 4y8j.1 | 4y8k.1 | 4y8l.1 | 4y8m.1 | 4y8n.1 | 4y8o.1 | 4y8p.1 | 4y8q.1 | 4y8r.1 | 4y8s.1 | 4y8t.1 | 4y8u.1 | 4y9y.1 | 4y9z.1 | 4ya0.1 | 4ya1.1 | 4ya2.1 | 4ya3.1 | 4ya4.1 | 4ya5.1 | 4ya7.1 | 4ya9.1 | 4z1l.1 | 5a5b.1 | 5ahj.1 | 5bou.1 | 5bxl.1 | 5bxn.1 | 5cgf.1 | 5cgg.1 | 5cgh.1 | 5cgi.1 | 5cz4.1 | 5cz5.1 | 5cz6.1 | 5cz7.1 | 5cz8.1 | 5cz9.1 | 5cza.1 | 5d0s.1 | 5d0t.1 | 5d0v.1 | 5d0w.1 | 5d0x.1 | 5d0z.1 | 5dki.1 | 5dkj.1 | 5fg7.1 | 5fg9.1 | 5fga.1 | 5fgd.1 | 5fge.1 | 5fgf.1 | 5fgg.1 | 5fgh.1 | 5fgi.1 | 5fhs.1 | 5jhr.1 | 5jhs.1 | 5l52.1 | 5l54.1 | 5l55.1 | 5l5a.1 | 5l5b.1 | 5l5d.1 | 5l5e.1 | 5l5f.1 | 5l5h.1 | 5l5i.1 | 5l5j.1 | 5l5o.1 | 5l5p.1 | 5l5q.1 | 5l5r.1 | 5l5s.1 | 5l5t.1 | 5l5u.1 | 5l5v.1 | 5l5w.1 | 5l5x.1 | 5l5y.1 | 5l5z.1 | 5l60.1 | 5l61.1 | 5l62.1 | 5l63.1 | 5l64.1 | 5l65.1 | 5l66.1 | 5l67.1 | 5l68.1 | 5l69.1 | 5l6a.1 | 5l6b.1 | 5l6c.1 | 5lai.1 | 5laj.1 | 5ltt.1 | 5m2b.1 | 5mp9.1 | 5mpa.1 | 5mpb.1 | 5mpc.1 | 5nif.1 | 5wvi.1 | 5wvk.1 | 6ef0.1 | 6ef1.1 | 6ef3.1 | 6fvt.1 | 6fvu.1 | 6fvv.1 | 6fvw.1 | 6fvx.1 | 6fvy.1 | 6g7f.1 | 6g8m.1 | 6g8n.1 | 6gop.1 | 6h39.1 | 6htb.1 | 6htc.1 | 6htd.1 | 6htp.1 | 6htr.1 | 6hub.1 | 6huc.1 | 6huq.1 | 6huu.1 | 6huv.1 | 6hv3.1 | 6hv4.1 | 6hv5.1 | 6hv7.1 | 6hva.1 | 6hvr.1 | 6hvs.1 | 6hvt.1 | 6hvu.1 | 6hvv.1 | 6hvw.1 | 6hvx.1 | 6hvy.1 | 6hw0.1 | 6hw3.1 | 6hw4.1 | 6hw5.1 | 6hw6.1 | 6hw7.1 | 6hw8.1 | 6hw9.1 | 6hwa.1 | 6hwb.1 | 6hwc.1 | 6hwd.1 | 6hwe.1 | 6hwf.1 | 6j2c.1 | 6j2n.1 | 6j2q.1 | 6j2x.1 | 6j30.1 | 6zou.1 | 6zp6.1 | 6zp8.1 | 7ls5.1 | 7ls6.1 | 7lsx.1 | 7o2l.1 | 7qo3.1 | 7qo5.1 | 7qo6.1 | 7tej.1 | 7teo.1 | 8bw1.1 | 8ohz.1 | 8oi1.1 | 8olr.1 | 8rhj.1 | 8rhk.1 | 8rhl.1 | 8rvl.1 | 8rvo.1 | 8rvp.1 | 8rvq.1 | 8t08.1 | 8t0m.1 | 8u6y.1 | 8u7u.1 | 9aw3.1 | 9aw5.1 | 9aw6.1 | 9aw7.1 | 9c97.1 | 9c98.1 | 9cgc.1 | 9d0t.1 | 9d35.1 | 9d3i.1 | 9d4c.1 | 9d4u.1 | 9ey9.1 | 9frw.1 | 9fst.1 | 9fsu.1 | 9fsv.1 | 9ft0.1 | 9ft1.1 | 9gbk.1 | 9qaf.1 | 9qai.1 | 9qb1.1 | 9qb4.1 | 9qbe.1 | 9qbi.1 | 9qbo.1 | 9qbw.1 | 9qby.1 | 9qc9.1 | 9qcf.1 | 9qck.1 | 9qd2.1 | 9qdf.1 | 9qds.1