SMTL ID : 4k9h.2 (2 other biounits)

Bace-1 inhibitor complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

monomer

Ligands

1 x 1QU: 1-cyclopentyl-N-[(2S,3R)-3-hydroxy-1-phenyl-4-{[3-(trifluoromethyl)benzyl]amino}butan-2-yl]-6-oxo-5-(2-oxopyrrolidin-1-yl)-1,6-dihydropyridine-3-carboxamide(Non-covalent)

1QU.1: 24 residues within 4Å: Chain A: Q.15, G.16, L.33, D.35, G.37, S.38, V.72, P.73, Y.74, T.75, Q.76, F.111, I.113, W.118, I.121, I.129, R.131, Y.201, D.231, G.233, T.234, T.235, N.236, R.238 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:L.33, A:Y.74, A:Y.74, A:Q.76, A:F.111, A:F.111, A:I.113, A:W.118, A:I.121, A:Y.201, A:N.236 Hydrogen bonds: A:D.35, A:Q.76, A:Q.76, A:D.231, A:G.233, A:T.235, A:T.235 Halogen bonds: A:R.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pennington, L.D. et al., Hydroxyethylamine-based inhibitors of BACE1: P1-P3 macrocyclization can improve potency, selectivity, and cell activity. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-07-10

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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