SMTL ID : 4k9h.3 (2 other biounits)

Bace-1 inhibitor complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

monomer

Ligands

1 x 1QU: 1-CYCLOPENTYL-N-[(2S,3R)-3-HYDROXY-1-PHENYL-4-{[3-(TRIFLUOROMETHYL)BENZYL]AMINO}BUTAN-2-YL]-6-OXO-5-(2-OXOPYRROLIDIN-1-YL)-1,6-DIHYDROPYRIDINE-3-CARBOXAMIDE(Non-covalent)

1QU.1: 25 residues within 4Å: Chain A: G.14, Q.15, G.16, L.33, D.35, G.37, S.38, V.72, P.73, Y.74, T.75, Q.76, F.111, I.113, W.118, I.121, I.129, R.131, Y.201, D.231, G.233, T.234, T.235, N.236, R.238 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.33, A:Y.74, A:Y.74, A:F.111, A:I.113, A:W.118, A:Y.201, A:N.236 Hydrogen bonds: A:D.35, A:T.75, A:Q.76, A:Q.76, A:D.231, A:G.233, A:T.234, A:T.235

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pennington, L.D. et al., Hydroxyethylamine-based inhibitors of BACE1: P1-P3 macrocyclization can improve potency, selectivity, and cell activity. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-07-10

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Beta-secretase 1

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