SMTL ID : 4odo.2 (2 other biounits)

Structure of SlyD from Thermus thermophilus in complex with FK506

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: Y.29, L.30, N.35, H.147, A.148 Ligand excluded by PLIP

1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.2: 4 residues within 4Å: Chain A: R.34, N.35, H.147 Ligands: FK5.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.35 Water bridges: A:H.147

1 x FK5: 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN(Non-covalent)

FK5.3: 13 residues within 4Å: Chain A: Y.13, L.15, D.23, L.27, N.35, L.36, I.37, L.40, A.62, Y.63, L.121, F.128 Ligands: BTB.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.37, A:L.40, A:Y.63, A:L.121 Hydrogen bonds: A:I.37, A:Y.63 Water bridges: A:N.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Quistgaard, E.M. et al., Molecular insights into substrate recognition and catalytic mechanism of the chaperone and FKBP peptidyl-prolyl isomerase SlyD. BMC Biol. (2016)

Release Date

2015-01-14

Peptides

Peptidyl-prolyl cis-trans isomerase SlyD: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Peptidyl-prolyl cis-trans isomerase SlyD

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