SMTL ID : 4q96.2 (2 other biounits)

CID of human RPRD1B in complex with an unmodified CTD peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

9 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 2 residues within 4Å: Chain A: P.75 Ligands: UNX.8 No protein-ligand interaction detected (PLIP) UNX.2: 3 residues within 4Å: Chain A: S.42, H.45, R.46 No protein-ligand interaction detected (PLIP) UNX.3: 1 residues within 4Å: Chain A: R.94 No protein-ligand interaction detected (PLIP) UNX.4: 3 residues within 4Å: Chain A: R.34, K.73 Ligands: UNX.7 No protein-ligand interaction detected (PLIP) UNX.5: 1 residues within 4Å: Chain A: S.19 No protein-ligand interaction detected (PLIP) UNX.6: 3 residues within 4Å: Chain A: E.113, R.114, S.115 No protein-ligand interaction detected (PLIP) UNX.7: 2 residues within 4Å: Chain A: H.32 Ligands: UNX.4 No protein-ligand interaction detected (PLIP) UNX.8: 3 residues within 4Å: Chain A: K.71 Ligands: UNX.1, UNX.9 No protein-ligand interaction detected (PLIP) UNX.9: 1 residues within 4Å: Ligands: UNX.8 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.10: 2 residues within 4Å: Chain B: K.102, R.106 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:K.102, B:R.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, Z. et al., RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation. Nat.Struct.Mol.Biol. (2014)

Release Date

2014-06-04

Peptides

Regulation of nuclear pre-mRNA domain-containing protein 1B: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Regulation of nuclear pre-mRNA domain-containing protein 1B

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