SMTL ID : 4trw.3 (2 other biounits)

Structure of BACE1 complex with a syn-HEA-type inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

monomer

Ligands

1 x GLU- ILE- TIH- LHE: L-alpha-glutamyl-L-isoleucyl-N-[(2R,3S)-1-{[(1S)-1-carboxybutyl]amino}-2-hydroxy-5-methylhexan-3-yl]-3-thiophen-2-yl-L-alaninamide(Non-covalent)

GLU-ILE-TIH-LHE.1: 20 residues within 4Å: Chain A: G.15, L.34, D.36, G.38, S.39, P.74, Y.75, T.76, Q.77, I.114, Y.202, I.230, D.232, G.234, T.235, T.236, N.237, R.239, R.311, K.325 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:L.34, A:T.76, A:I.114 Hydrogen bonds: A:G.15, A:D.36, A:T.76, A:T.76, A:T.76, A:Q.77, A:Y.202, A:D.232, A:G.234, A:T.235, A:T.236, A:T.236, A:T.236, A:N.237, A:R.311 Salt bridges: A:K.228, A:K.325

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hattori, Y. et al., Evaluation of transition-state mimics in a superior BACE1 cleavage sequence as peptide-mimetic BACE1 inhibitors. Bioorg.Med.Chem. (2015)

Release Date

2015-07-01

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Beta-secretase 1

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