SMTL ID : 4xqs.1

Crystal structure of human FPPS in complex with one magnesium ion

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: D.265, D.269 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.1, H2O.1, H2O.1, H2O.1, H2O.1 MG.4: 2 residues within 4Å: Chain B: D.265, D.269 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.3, H2O.3, H2O.3, H2O.3, H2O.3

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: G.78, K.79, R.82, Q.118, R.135 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.79, A:R.82, A:Q.118 Water bridges: A:Y.80, A:Y.80 Salt bridges: A:R.135 SO4.3: 7 residues within 4Å: Chain A: H.57, P.58, E.59, I.60 Chain B: S.217, K.220, Y.221 7 PLIP interactions: 3 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:S.217, B:Y.221, A:H.57, A:E.59, A:I.60 Salt bridges: B:K.220, A:H.57 SO4.5: 5 residues within 4Å: Chain B: G.78, K.79, R.82, Q.118, R.135 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:K.79, B:R.82, B:Q.118 Water bridges: B:Y.80, B:Y.80 Salt bridges: B:R.135 SO4.6: 7 residues within 4Å: Chain A: S.217, K.220, Y.221 Chain B: H.57, P.58, E.59, I.60 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:S.217, B:H.57, B:E.59, B:I.60 Salt bridges: A:K.220, B:H.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, J. et al., Crystal structure of human FPPS in complex with one magnesium ion. To Be Published

Release Date

2016-01-20

Peptides

Farnesyl pyrophosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
F

Farnesyl pyrophosphate synthase

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