SMTL ID : 4xy8.1

Crystal Structure of the bromodomain of BRD9 in complex with a 2-amine-9H-purine ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x 43U: 6-(5-bromo-2-methoxyphenyl)-9H-purin-2-amine(Non-covalent)

43U.1: 8 residues within 4Å: Chain A: F.33, F.34, F.36, V.38, I.42, Y.88, N.89, Y.95 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.36, A:I.42, A:Y.95 Hydrogen bonds: A:N.89, A:N.89 pi-Stacking: A:F.33, A:Y.95 pi-Cation interactions: A:Y.95

1 x BR: BROMIDE ION(Non-covalent)

BR.2: 3 residues within 4Å: Chain A: T.93, V.94, Y.95 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Picaud, S. et al., 9H-Purine Scaffold Reveals Induced-Fit Pocket Plasticity of the BRD9 Bromodomain. J.Med.Chem. (2015)

Release Date

2015-03-11

Peptides

Bromodomain-containing protein 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 9

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