SMTL ID : 5a14.1

Human CDK2 with type II inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x LQ5: 1-[4-(2-azanylpyrimidin-4-yl)oxyphenyl]-3-[4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]urea(Non-covalent)

LQ5.1: 22 residues within 4Å: Chain A: V.19, A.32, K.34, E.52, L.55, L.56, L.59, I.64, V.65, F.81, E.82, F.83, L.84, V.124, L.125, H.126, R.127, L.144, A.145, D.146, F.147, F.153 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:A.32, A:K.34, A:L.55, A:L.56, A:F.81, A:A.145, A:D.146, A:F.147, A:F.153 Hydrogen bonds: A:E.52, A:E.52, A:L.84, A:L.84, A:D.146 Water bridges: A:D.128 Halogen bonds: A:L.144 LQ5.2: 8 residues within 4Å: Chain A: I.210, F.214, K.238, S.240, F.241, P.242, K.243, W.244 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.210, A:K.238, A:F.241, A:P.242 Hydrogen bonds: A:S.240, A:S.240 Water bridges: A:K.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alexander, L.T. et al., Type II Inhibitors Targeting Cdk2. Acs Chem.Biol. (2015)

Release Date

2015-07-22

Peptides

CYCLIN-DEPENDENT KINASE 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYCLIN-DEPENDENT KINASE 2

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