SMTL ID : 5aii.2 (7 other biounits)

Discovery and characterization of thermophilic limonene-1,2-epoxide hydrolases from hot spring metagenomic libraries. CH55-sample-PEG complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

homo-dimer

Ligands

3 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.1: 12 residues within 4Å: Chain A: Y.32, N.34, M.37, F.49, Q.52, L.53, W.60, D.82, F.84, F.114, F.119, M.123 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.32, A:D.82 Water bridges: A:N.34, A:Q.52, A:Q.52 PG4.2: 9 residues within 4Å: Chain B: N.34, F.49, L.53, W.60, D.82, F.84, I.94, F.114, F.119 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.82 Water bridges: B:N.34 PG4.5: 6 residues within 4Å: Chain B: M.1, T.2, A.71, A.72, D.104, G.105 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:M.1

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 4 residues within 4Å: Chain B: A.67, G.69, D.70, A.71 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:A.67 PEG.4: 3 residues within 4Å: Chain A: R.111 Chain B: H.63, R.95 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Water bridges: A:Y.113, B:T.81

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 4 residues within 4Å: Chain B: D.59, F.84, T.85, T.91 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:F.84

1 x HIS: HISTIDINE(Non-covalent)

HIS.7: 3 residues within 4Å: Chain B: D.59, E.61, R.83 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Ligand interactions Hydrogen bonds: B:D.59, H.7, H.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ferrandi, E.E. et al., Discovery and Characterization of Thermophilic Limonene-1,2-Epoxide Hydrolases from Hot Spring Metagenomic Libraries. FEBS J. (2015)

Release Date

2015-06-17

Peptides

LIMONENE-1,2-EPOXIDE HYDROLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

LIMONENE-1,2-EPOXIDE HYDROLASE

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