SMTL ID : 5aii.8 (7 other biounits)

Discovery and characterization of thermophilic limonene-1,2-epoxide hydrolases from hot spring metagenomic libraries. CH55-sample-PEG complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

homo-dimer

Ligands

3 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.1: 9 residues within 4Å: Chain A: N.34, M.37, F.49, L.50, L.53, D.82, F.84, I.94, F.114 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.82 PG4.5: 5 residues within 4Å: Chain A: M.1, T.2, A.71, D.104, G.105 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:M.1 PG4.6: 9 residues within 4Å: Chain B: M.37, F.49, Q.52, L.53, D.82, F.84, I.94, F.114, F.119 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.82 Water bridges: B:Y.32, B:Y.32, B:N.34

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 3 residues within 4Å: Chain A: R.111 Chain B: H.63, R.95 7 PLIP interactions: 2 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:R.95 Water bridges: B:T.81, A:R.111, A:R.111, A:R.111, A:R.111, A:Y.113 PEG.3: 4 residues within 4Å: Chain A: A.67, G.69, D.70, A.71 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.67

1 x PG6: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE(Non-covalent)

PG6.4: 4 residues within 4Å: Chain A: H.63, E.79, R.95 Chain B: R.111 3 PLIP interactions: 3 interactions with chain B Water bridges: B:D.33, B:T.75, B:R.111

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.7: 4 residues within 4Å: Chain A: V.35, P.36 Chain B: D.115, Q.118 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:Q.118 Hydrogen bonds: B:Q.118, A:V.35 Water bridges: B:D.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ferrandi, E.E. et al., Discovery and Characterization of Thermophilic Limonene-1,2-Epoxide Hydrolases from Hot Spring Metagenomic Libraries. FEBS J. (2015)

Release Date

2015-06-17

Peptides

LIMONENE-1,2-EPOXIDE HYDROLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

B
J

LIMONENE-1,2-EPOXIDE HYDROLASE

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