SMTL ID : 5fe5.2 (1 other biounit)

Crystal structure of human PCAF bromodomain in complex with fragment MB093 (fragment 7)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

monomer

Ligands

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 1 residues within 4Å: Chain A: E.94 No protein-ligand interaction detected (PLIP) EDO.2: 2 residues within 4Å: Chain A: P.39, Y.49 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.49 EDO.3: 2 residues within 4Å: Chain A: P.92 Ligands: EDO.4 No protein-ligand interaction detected (PLIP) EDO.4: 1 residues within 4Å: Ligands: EDO.3 No protein-ligand interaction detected (PLIP) EDO.5: 7 residues within 4Å: Chain A: T.19, S.22, I.23, Q.26, K.111, E.114, A.115 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.22, A:K.111, A:A.115

1 x 2QC: 1-[4-(1,2,3-thiadiazol-4-yl)phenyl]methanamine(Non-covalent)

2QC.6: 7 residues within 4Å: Chain A: P.35, F.36, E.44, C.87, Y.90, N.91, Y.97 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.90, A:Y.90 Hydrogen bonds: A:N.91, A:Y.97 Water bridges: A:C.87 pi-Stacking: A:Y.97, A:Y.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaikuad, A. et al., Structure-Based Identification of Inhibitory Fragments Targeting the p300/CBP-Associated Factor Bromodomain. J.Med.Chem. (2016)

Release Date

2016-01-13

Peptides

Histone acetyltransferase KAT2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Histone acetyltransferase KAT2B

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