SMTL ID : 5gk3.1

Native structure of fructose 1,6-bisphosphate aldolase from Escherichia coli at 1.8 Angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: Q.19, Y.207, P.215, F.217, S.259, L.260, N.261 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.261, A:N.261 Water bridges: A:Q.19, A:K.26, A:K.26, A:N.261 GOL.4: 7 residues within 4Å: Chain B: Q.19, Y.207, P.215, F.217, S.259, L.260, N.261 9 PLIP interactions: 9 interactions with chain B Water bridges: B:Q.23, B:Q.23, B:Y.207, B:Y.207, B:Y.207, B:P.215, B:F.217, B:N.261, B:N.261 GOL.5: 6 residues within 4Å: Chain B: I.88, H.92, A.126, K.129, H.130, L.138 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.92, B:H.130

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.111, E.175, H.227, H.265 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.111, A:E.175, A:H.227, A:H.265, H2O.5 ZN.6: 4 residues within 4Å: Chain B: H.111, E.175, H.227, H.265 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.111, B:E.175, B:H.227, B:H.265, H2O.14

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 8 residues within 4Å: Chain A: S.89, H.92, H.93, Q.96 Chain B: S.89, H.92, H.93, Q.96 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:H.92, B:Q.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tran, T.H. et al., Apo structure of fructose 1,6-bisphosphate aldolase from Escherichia coli at 1.8 Angstrom resolution. To Be Published

Release Date

2017-07-05

Peptides

Fructose-bisphosphate aldolase class 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fructose-bisphosphate aldolase class 2

Related Entries With Identical Sequence