SMTL ID : 5mio.2 (2 other biounits)

KIF2C-DARPIN FUSION PROTEIN BOUND TO TUBULIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.19 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 19 residues within 4Å: Chain A: G.10, Q.11, C.12, Q.15, N.99, S.138, G.141, G.142, T.143, G.144, V.169, P.171, V.175, D.177, E.181, N.204, Y.222, L.225, N.226 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:Q.11, A:C.12, A:S.138, A:G.142, A:T.143, A:T.143, A:G.144, A:V.175, A:E.181, A:N.204, A:N.204, A:N.226, A:N.226 pi-Stacking: A:Y.222, A:Y.222

1 x LOC: N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide(Non-covalent)

LOC.2: 16 residues within 4Å: Chain A: C.239, L.240, L.246, A.248, D.249, K.252, L.253, N.256, M.257, T.312, V.313, A.314, I.316, N.348, K.350, I.368 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.248, A:K.252, A:L.253, A:N.256, A:K.350

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, W. et al., Insight into microtubule disassembly by kinesin-13s from the structure of Kif2C bound to tubulin. Nat Commun (2017)

Release Date

2017-07-19

Peptides

Tubulin beta chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tubulin beta chain

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