SMTL ID : 7cnm.1

YDX in complex with tubulin

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.44 Å
Oligo State
hetero-2-2-1-1-mer
Ligands
2 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
3 x MG: MAGNESIUM ION(Non-covalent)
2 x CA: CALCIUM ION(Non-covalent)
2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
3 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
2 x G70: (2~{S},4~{S})-4-[[2-[(1~{R},3~{R})-1-acetyloxy-4-methyl-3-[[(2~{S},3~{S})-3-methyl-2-[[(2~{R})-1-methylpiperidin-2-yl]carbonylamino]pentanoyl]amino]pentyl]-1,3-thiazol-4-yl]carbonylamino]-5-cyclohexyl-2-methyl-pentanoic acid(Non-covalent)
1 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Chengyong, W. et al., The high-resolution X-ray structure of vinca-domain inhibitors of microtubules provides a rational approach for drug design. Febs Lett. (2021)
Release Date
2021-08-04
Peptides
Tubulin alpha-1B chain: AC
Tubulin beta chain: BD
Stathmin-4: E
Tubulin tyrosine ligase: F
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
C
B
B
D
D
E
E
F
F

Tubulin alpha-1B chain

Tubulin beta chain

Stathmin-4

Tubulin tyrosine ligase

Related Entries With Identical Sequence

3j8x.1 | 3j8y.1 | 3jak.1 | 3jal.1 | 3jar.1 | 3jas.1 | 3jat.1 | 3jaw.1 | 3ryc.1 | 3ryf.1 | 3ryh.1 | 3ryi.1 | 3ut5.1 | 4eb6.1 | 4f61.1 | 4f6r.1 | 4hna.1 | 4i4t.1 | 4i50.1 | 4i55.1 | 4ihj.1 | 4iij.1 | 4lnu.1 | 4o2a.1 | 4o2b.1 | 4o4h.1 | 4o4i.1 | 4o4j.1 | 4o4l.1 | 4tuy.1  more...