SMTL ID : 5xlt.1

The crystal structure of tubulin in complex with 4'-demethylepipodophyllotoxin

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.81 Å
Oligo State
hetero-2-2-1-1-mer
Ligands
2 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
4 x MG: MAGNESIUM ION(Non-covalent)
2 x CA: CALCIUM ION(Non-covalent)
2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
2 x 89O: (5S,5aR,8aR,9R)-9-(3,5-dimethoxy-4-oxidanyl-phenyl)-5-oxidanyl-5a,6,8a,9-tetrahydro-5H-[2]benzofuro[6,5-f][1,3]benzodioxol-8-one(Non-covalent)
1 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Niu, L. et al., Structure of 4'-demethylepipodophyllotoxin in complex with tubulin provides a rationale for drug design. Biochem. Biophys. Res. Commun. (2017)
Release Date
2017-09-27
Peptides
Tubulin alpha-1B chain: AC
Tubulin beta-2B chain: BD
Stathmin-4: E
Tubulin tyrosine ligase: F
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
C
B
B
D
D
E
E
F
F