SMTL ID : 5n7f.1 (1 other biounit)

MAGI-1 complexed with a pRSK1 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: C.221, S.222, R.223, T.224, R.267, V.310, L.347, C.350, K.354 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.267, A:R.267, A:K.354 Water bridges: A:N.225, A:N.225 GOL.2: 6 residues within 4Å: Chain A: A.268, E.269, G.271, D.275, R.308, S.309 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.271, A:D.275, A:S.309, A:S.309, A:S.309 GOL.3: 7 residues within 4Å: Chain A: P.194, D.198, R.223, E.227, I.231, S.382, R.383 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.383, A:R.383 Water bridges: A:P.194, A:R.223, A:E.227

5 x CA: CALCIUM ION(Non-covalent)

CA.4: 3 residues within 4Å: Chain A: G.138, V.139, E.141 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.138, A:V.139, A:E.141, A:E.141, H2O.4 CA.5: 5 residues within 4Å: Chain A: G.290, V.291, R.293, G.295, E.335 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.290, A:R.293, A:G.295, A:E.335, H2O.4 CA.6: 1 residues within 4Å: Chain A: S.322 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.322, H2O.7 CA.7: 5 residues within 4Å: Chain A: D.364, S.365, M.366, K.367, G.368 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.364, H2O.8 CA.8: 3 residues within 4Å: Chain A: S.70, D.73, E.100 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gogl, G. et al., Dynamic control of RSK complexes by phosphoswitch-based regulation. FEBS J. (2018)

Release Date

2017-11-08

Peptides

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1,Annexin A2: A
Ribosomal protein S6 kinase alpha-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1,Annexin A2

Ribosomal protein S6 kinase alpha-1

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