SMTL ID : 5n7g.1 (1 other biounit)

MAGI-1 complexed with a synthetic pRSK1 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

monomer

Ligands

1 x LEU- PRO- SEP- THR- THR- LEU: Ribosomal protein S6 kinase alpha-1(Non-covalent)

LEU-PRO-SEP-THR-THR-LEU.1: 14 residues within 4Å: Chain A: R.29, G.30, F.31, G.32, F.33, T.34, V.35, V.36, G.37, D.39, K.48, H.81, V.85, F.88 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.35, A:V.85, A:F.88 Hydrogen bonds: A:F.31, A:G.32, A:F.33, A:F.33, A:V.35, A:V.35 Salt bridges: A:K.48

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: C.221, S.222, R.223, T.224, R.267, V.310, C.350, K.354 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.222, A:N.225, A:R.267, A:R.267, A:K.354 GOL.3: 7 residues within 4Å: Chain A: A.268, G.271, D.275, L.278, R.308, S.309, H.312 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.271, A:D.275, A:S.309, A:S.309, A:S.309 GOL.4: 6 residues within 4Å: Chain A: P.194, D.198, R.223, E.227, S.382, R.383 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.383, A:R.383

6 x CA: CALCIUM ION(Non-covalent)

CA.5: 3 residues within 4Å: Chain A: G.138, V.139, E.141 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:G.138, A:V.139, A:E.141 CA.6: 4 residues within 4Å: Chain A: G.290, R.293, G.295, E.335 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.290, A:R.293, A:G.295, A:E.335, A:E.335 CA.7: 1 residues within 4Å: Chain A: S.322 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.322 CA.8: 5 residues within 4Å: Chain A: D.364, S.365, G.368, K.369, R.372 No protein-ligand interaction detected (PLIP) CA.9: 1 residues within 4Å: Chain A: D.73 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.73 CA.10: 4 residues within 4Å: Chain A: M.366, G.368, G.370, D.410 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:M.366, A:G.368, A:G.370, A:D.410, A:D.410

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gogl, G. et al., Dynamic control of RSK complexes by phosphoswitch-based regulation. FEBS J. (2018)

Release Date

2017-11-08

Peptides

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1,Annexin A2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1,Annexin A2

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