SMTL ID : 6twq.2 (1 other biounit)

MAGI1_2 complexed with a 16E6 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain B: C.221, S.222, R.223, T.224, R.267, V.310, L.347, C.350, K.354 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.222, B:R.267, B:K.354

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 4 residues within 4Å: Chain B: H.182, G.370, T.371, D.373 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:T.371, B:T.371, B:T.371, B:D.373, B:D.373 Water bridges: B:T.371 Salt bridges: B:H.182

5 x CA: CALCIUM ION(Non-covalent)

CA.3: 2 residues within 4Å: Chain B: K.176, E.184 No protein-ligand interaction detected (PLIP) CA.4: 6 residues within 4Å: Chain B: M.206, G.208, L.209, G.210, T.211, D.250 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:G.208, B:D.250 CA.5: 2 residues within 4Å: Chain B: G.138, V.139 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:G.138, B:V.139 CA.6: 5 residues within 4Å: Chain B: G.290, R.293, K.294, G.295, E.335 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:G.290, B:R.293, B:G.295, B:E.335 CA.7: 4 residues within 4Å: Chain B: M.366, G.368, G.370, D.410 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:M.366, B:G.368, B:G.370, B:D.410

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gogl, G. et al., Dual Specificity PDZ- and 14-3-3-Binding Motifs: A Structural and Interactomics Study. Structure (2020)

Release Date

2020-04-01

Peptides

THR-ARG-ARG-GLU-THR-GLN-LEU: A
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1,Annexin A2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
A

THR-ARG-ARG-GLU-THR-GLN-LEU

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1,Annexin A2

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