SMTL ID : 6twq.1 (1 other biounit)

MAGI1_2 complexed with a 16E6 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 5 residues within 4Å: Chain A: G.181, H.182, K.412, G.413, Y.415 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.182 Salt bridges: A:H.182 CIT.3: 5 residues within 4Å: Chain A: H.182, G.370, T.371, R.372, D.373 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.182, A:D.373, A:D.373, A:D.373 Salt bridges: A:R.372, A:K.374

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: C.221, S.222, R.223, T.224, R.267, V.310, K.354 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.267, A:K.354

6 x CA: CALCIUM ION(Non-covalent)

CA.4: 1 residues within 4Å: Chain A: S.309 No protein-ligand interaction detected (PLIP) CA.5: 3 residues within 4Å: Chain A: G.138, V.139, E.141 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:G.138, A:V.139 CA.6: 2 residues within 4Å: Chain A: K.176, E.184 No protein-ligand interaction detected (PLIP) CA.7: 4 residues within 4Å: Chain A: M.206, G.208, L.209, D.250 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:G.208, A:D.250 CA.8: 4 residues within 4Å: Chain A: R.293, K.294, G.295, E.335 No protein-ligand interaction detected (PLIP) CA.9: 4 residues within 4Å: Chain A: M.366, G.368, G.370, D.410 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:M.366, A:G.368, A:G.370, A:D.410

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gogl, G. et al., Dual Specificity PDZ- and 14-3-3-Binding Motifs: A Structural and Interactomics Study. Structure (2020)

Release Date

2020-04-01

Peptides

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1,Annexin A2: A
THR-ARG-ARG-GLU-THR-GLN-LEU: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1,Annexin A2

THR-ARG-ARG-GLU-THR-GLN-LEU

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