SMTL ID : 5naj.1 (3 other biounits)

ENAH EVH1 in complex with Ac-[2-Cl-F]-[ProM-1]-[ProM-1]-OH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.46 Å

Oligo State

monomer

Ligands

1 x 8SE: (3~{S},7~{R},10~{R},13~{S})-4-[[(3~{S},7~{R},10~{R},13~{S})-4-[(2~{S})-2-acetamido-3-(2-chlorophenyl)propanoyl]-2-oxidanylidene-1,4-diazatricyclo[8.3.0.0^{3,7}]tridec-8-en-13-yl]carbonyl]-2-oxidanylidene-1,4-diazatricyclo[8.3.0.0^{3,7}]tridec-8-ene-13-carboxylic acid(Non-covalent)

8SE.1: 13 residues within 4Å: Chain A: M.16, Y.18, W.25, K.71, N.73, A.75, T.76, F.79, Q.81, W.82, R.83, V.88, N.92 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.18, A:W.25, A:W.25, A:N.73, A:T.76, A:F.79, A:F.79 Hydrogen bonds: A:W.25, A:Q.81 Water bridges: A:N.92 pi-Cation interactions: A:R.83

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.12, F.34, I.55, Q.56 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.56 Water bridges: A:F.34 Salt bridges: A:R.12 SO4.3: 3 residues within 4Å: Chain A: R.36, H.38, R.53 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.36, A:R.53 Salt bridges: A:R.36, A:H.38, A:R.53 SO4.4: 4 residues within 4Å: Chain A: V.17, R.86, Q.87, Y.89 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.87, A:Y.89, A:Y.89 Water bridges: A:G.29 Salt bridges: A:R.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barone, M. et al., Designed nanomolar small-molecule inhibitors of Ena/VASP EVH1 interaction impair invasion and extravasation of breast cancer cells. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2017-05-24

Peptides

Protein enabled homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein enabled homolog

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