SMTL ID : 6rcj.1

ENAH EVH1 in complex with Ac-[2-Cl-F]-[ProM-2]-[ProM-15]-OMe

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x K0H: methyl 2-[(3~{a}~{R},6~{R},8~{a}~{S})-1-[(3~{S},6~{R},8~{a}~{S})-1'-[(2~{S})-2-acetamido-3-(2-chlorophenyl)propanoyl]-5-oxidanylidene-spiro[1,2,3,8~{a}-tetrahydroindolizine-6,2'-pyrrolidine]-3-yl]carbonyl-6-ethyl-8-oxidanylidene-3,3~{a},6,8~{a}-tetrahydro-2~{H}-pyrrolo[2,3-c]azepin-7-yl]ethanoate(Non-covalent)

K0H.1: 13 residues within 4Å: Chain A: M.16, Y.18, W.25, K.71, N.73, A.75, T.76, F.79, Q.81, W.82, R.83, V.88, N.92 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.18, A:Y.18, A:W.25, A:W.25, A:K.71, A:N.73, A:T.76, A:F.79, A:F.79, A:R.83 Hydrogen bonds: A:W.25, A:Q.81, A:R.83 Water bridges: A:N.73 pi-Cation interactions: A:R.83

2 x NO3: NITRATE ION(Non-functional Binders)

NO3.2: 6 residues within 4Å: Chain A: Q.10, A.11, R.12, R.36, I.55, D.98 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.12, A:R.12, A:R.36, A:R.36, A:D.98 NO3.3: 3 residues within 4Å: Chain A: R.36, H.38, R.53 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.36, A:H.38 Water bridges: A:Q.10, A:R.53, A:R.53

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 3 residues within 4Å: Chain A: R.12, G.94, S.95 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barone, M. et al., Designed nanomolar small-molecule inhibitors of Ena/VASP EVH1 interaction impair invasion and extravasation of breast cancer cells. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2020-05-13

Peptides

Protein enabled homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein enabled homolog

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