- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.47 Å
- Oligo State
- monomer
- Ligands
- 1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.4: 2 residues within 4Å:- Chain A: N.11, K.15
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.11
- Water bridges: A:S.13, A:S.13
NAG.5: 4 residues within 4Å:- Chain A: L.279, E.282, N.286, F.323
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:L.279, A:E.282
- Hydrogen bonds: A:E.282, A:E.282, A:E.282, A:N.286, A:F.323
- Water bridges: A:F.323, A:F.323, A:F.323
NAG.6: 3 residues within 4Å:- Chain A: N.141, T.143, L.144
2 PLIP interactions:2 interactions with chain A- Water bridges: A:N.141, A:N.141
NAG.7: 8 residues within 4Å:- Chain A: F.155, G.156, G.157, N.161, L.162, T.163, Q.213
- Ligands: MOH.19
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:L.162
- Hydrogen bonds: A:T.163, A:Q.213
- Water bridges: A:G.157, A:N.161, A:N.161, A:L.162
NAG.8: 4 residues within 4Å:- Chain A: H.118, A.132, F.133, N.182
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.182
- Water bridges: A:F.133, A:R.257
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.10: 5 residues within 4Å:- Chain A: D.206, R.208, D.230, D.231, F.232
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.206
GOL.11: 2 residues within 4Å:- Chain A: Q.224, F.225
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.224
- Water bridges: A:D.139
GOL.12: 4 residues within 4Å:- Chain A: V.149, M.216, D.217, R.220
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.217, A:D.217, A:R.220
- 10 x MOH: METHANOL(Non-functional Binders)
MOH.13: 1 residues within 4Å:- Chain A: T.179
No protein-ligand interaction detected (PLIP)MOH.14: 4 residues within 4Å:- Chain A: T.276, P.277, C.278, L.279
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:C.278, A:L.279
MOH.15: 3 residues within 4Å:- Chain A: Y.151, R.154, K.171
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.151, A:R.154, A:R.154
MOH.16: 1 residues within 4Å:- Chain A: R.50
2 PLIP interactions:2 interactions with chain A- Water bridges: A:R.50, A:R.50
MOH.17: 5 residues within 4Å:- Chain A: N.18, R.227, M.228, P.229, D.230
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.18, A:R.227, A:M.228
MOH.18: 1 residues within 4Å:- Chain A: T.143
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.143
MOH.19: 2 residues within 4Å:- Chain A: V.246
- Ligands: NAG.7
No protein-ligand interaction detected (PLIP)MOH.20: 2 residues within 4Å:- Chain A: T.143, Q.147
1 PLIP interactions:1 interactions with chain A- Water bridges: A:T.143
MOH.21: 4 residues within 4Å:- Chain A: D.70, N.71, Q.72
- Ligands: CL.3
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.70, A:D.70, A:N.71, A:Q.72
MOH.22: 3 residues within 4Å:- Chain A: K.261, I.262, N.263
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.263
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ramirez-Escudero, M. et al., Structural Insights into the Substrate Promiscuity of a Laboratory-Evolved Peroxygenase. Acs Chem.Biol. (2018)
- Release Date
- 2018-12-26
- Peptides
- Aromatic peroxygenase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.47 Å
- Oligo State
- monomer
- Ligands
- 1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- 10 x MOH: METHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ramirez-Escudero, M. et al., Structural Insights into the Substrate Promiscuity of a Laboratory-Evolved Peroxygenase. Acs Chem.Biol. (2018)
- Release Date
- 2018-12-26
- Peptides
- Aromatic peroxygenase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A