SMTL ID : 5shb.4 (3 other biounits)

CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH C2(=NN(c1ccncc1)C=CC2=O)c3ccnn3c4cccc(c4)Br, micromolar IC50=0.017329

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.83, H.117, D.118, D.228 Ligands: MG.2 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.83, A:H.117, A:D.118, A:D.228, H2O.1, H2O.4

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: D.118, E.146, H.149 Ligands: ZN.1 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.118, H2O.1, H2O.1, H2O.1, H2O.3, H2O.4

1 x JCJ: 3-[1-(3-bromophenyl)-1H-pyrazol-5-yl]-1-(pyridin-4-yl)pyridazin-4(1H)-one(Non-covalent)

JCJ.3: 12 residues within 4Å: Chain A: Y.78, H.79, L.189, D.228, L.229, S.231, V.232, I.246, F.250, M.267, Q.280, F.283 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.189, A:L.229, A:V.232, A:I.246, A:I.246, A:F.250, A:F.250, A:F.283, A:F.283 Hydrogen bonds: A:S.231, A:Q.280 Water bridges: A:Y.78 pi-Stacking: A:F.250, A:F.283

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Flohr, A. et al., Crystal Structure of a human phosphodiesterase 10 complex. To be published

Release Date

2022-10-12

Peptides

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A

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