SMTL ID : 5si5.3 (3 other biounits)

Crystal Structure of human phosphodiesterase 10 in complex with N-(12-methoxy-5-methyl-3-propyl-2,4,8,13-tetrazatricyclo[7.4.0.02,6]trideca-1(13),3,5,7,9,11-hexaen-7-yl)methanesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.83, H.117, D.118, D.228 Ligands: MG.2 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.83, A:H.117, A:D.118, A:D.228, H2O.1, H2O.3

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.118 Ligands: ZN.1 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.118, H2O.1, H2O.1, H2O.2, H2O.3, H2O.4

1 x JM0: N-[(10S)-2-methoxy-7-methyl-9-propylimidazo[1,5-a]pyrido[3,2-e]pyrazin-6-yl]methanesulfonamide(Non-covalent)

JM0.3: 15 residues within 4Å: Chain A: Y.78, H.79, L.229, S.231, V.232, T.239, A.243, I.246, Y.247, F.250, M.267, Q.280, F.283, Y.284, W.316 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.232, A:I.246, A:F.250, A:F.283, A:F.283 Hydrogen bonds: A:Q.280, A:Y.284 pi-Stacking: A:F.250, A:F.283, A:F.283

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Flohr, A. et al., Crystal Structure of a human phosphodiesterase 10 complex. To be published

Release Date

2022-10-12

Peptides

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A

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