SMTL ID : 5sja.4 (3 other biounits)

Crystal Structure of human phosphodiesterase 10 in complex with N-(2-tert-butyl-5-methylpyrazol-3-yl)-1-phenyl-3-(pyridin-2-yloxymethyl)thieno[2,3-c]pyrazole-5-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.83, H.117, D.118, D.228 Ligands: MG.2 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.83, A:H.117, A:D.118, A:D.228, H2O.2, H2O.3

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: D.118, E.146 Ligands: ZN.1 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.118, H2O.1, H2O.2, H2O.2, H2O.2, H2O.3

1 x JYU: N-(1-tert-butyl-3-methyl-1H-pyrazol-5-yl)-1-phenyl-3-{[(pyridin-2-yl)oxy]methyl}-1H-thieno[2,3-c]pyrazole-5-carboxamide(Non-covalent)

JYU.3: 12 residues within 4Å: Chain A: S.127, L.189, F.193, S.231, V.232, I.246, Y.247, F.250, M.267, G.279, Q.280, F.283 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.189, A:F.193, A:V.232, A:I.246, A:F.283, A:F.283, A:F.283 Hydrogen bonds: A:Q.280 pi-Stacking: A:F.250, A:F.250, A:F.283

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Flohr, A. et al., Crystal Structure of a human phosphodiesterase 10 complex. To be published

Release Date

2022-10-12

Peptides

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A

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