- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x K: POTASSIUM ION(Non-covalent)
K.2: 6 residues within 4Å:- Chain A: E.386, S.387, H.388
- Chain B: G.217, G.219, C.222
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain A- Metal complexes: B:G.217, B:G.219, B:C.222, A:E.386, A:S.387
K.5: 7 residues within 4Å:- Chain B: E.386, S.387, H.388, H.390
- Chain C: G.217, G.219, C.222
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain C- Metal complexes: B:E.386, B:S.387, B:H.388, C:G.219, C:C.222
K.8: 7 residues within 4Å:- Chain C: E.386, S.387, H.388
- Chain D: G.217, P.218, G.219, C.222
5 PLIP interactions:3 interactions with chain D, 2 interactions with chain C- Metal complexes: D:G.217, D:G.219, D:C.222, C:E.386, C:S.387
K.10: 7 residues within 4Å:- Chain A: G.217, P.218, G.219, C.222
- Chain D: E.386, S.387, H.388
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain D- Metal complexes: A:G.217, A:G.219, A:C.222, D:E.386, D:S.387
- 4 x 8L1: N-{4-chloro-3-[4-(trifluoromethyl)-1,3-thiazol-2-yl]phenyl}-N'-(2-{3-[(1E)-N-hydroxyethanimidoyl]phenyl}propan-2-yl)urea(Non-covalent)
8L1.4: 14 residues within 4Å:- Chain A: L.47, P.48, S.357, G.360, Y.361
- Chain B: A.167, H.168, T.224, M.305, G.306, M.311, V.330, E.332
- Ligands: IMP.3
11 PLIP interactions:4 interactions with chain A, 7 interactions with chain B- Hydrophobic interactions: A:P.48, A:Y.361, B:A.167, B:E.332
- Hydrogen bonds: A:Y.361, B:T.224, B:T.224, B:E.332, B:E.332
- Water bridges: A:S.357, B:E.332
8L1.7: 16 residues within 4Å:- Chain B: L.47, P.48, S.357, G.360, Y.361
- Chain C: V.145, S.166, A.167, H.168, T.224, M.305, G.306, M.311, V.330, E.332
- Ligands: IMP.6
6 PLIP interactions:2 interactions with chain B, 4 interactions with chain C- Hydrophobic interactions: B:P.48, B:Y.361
- Hydrogen bonds: C:T.224, C:T.224, C:E.332, C:E.332
8L1.9: 14 residues within 4Å:- Chain A: A.167, H.168, T.224, M.305, G.306, M.311, V.330, E.332
- Chain D: L.47, P.48, S.357, G.360, Y.361
- Ligands: IMP.1
8 PLIP interactions:3 interactions with chain D, 5 interactions with chain A- Hydrophobic interactions: D:P.48, D:Y.361
- Hydrogen bonds: D:Y.361, A:T.224, A:T.224, A:E.332, A:E.332, A:E.332
8L1.12: 16 residues within 4Å:- Chain C: P.48, S.357, G.360, Y.361
- Chain D: V.145, S.166, A.167, H.168, S.171, T.224, M.305, G.306, M.311, V.330, E.332
- Ligands: IMP.11
12 PLIP interactions:8 interactions with chain D, 4 interactions with chain C- Hydrophobic interactions: D:A.167, D:E.332, C:P.48, C:Y.361
- Hydrogen bonds: D:S.166, D:T.224, D:T.224, D:E.332, D:E.332, D:E.332
- Water bridges: C:Y.361, C:Y.361
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Mycobacterium tuberculosis in the presence of TBK6. To Be Published
- Release Date
- 2017-03-01
- Peptides
- Inosine-5'-monophosphate dehydrogenase,Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x K: POTASSIUM ION(Non-covalent)
- 4 x 8L1: N-{4-chloro-3-[4-(trifluoromethyl)-1,3-thiazol-2-yl]phenyl}-N'-(2-{3-[(1E)-N-hydroxyethanimidoyl]phenyl}propan-2-yl)urea(Non-covalent)
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Mycobacterium tuberculosis in the presence of TBK6. To Be Published
- Release Date
- 2017-03-01
- Peptides
- Inosine-5'-monophosphate dehydrogenase,Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D